RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MYCP01106 439 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-219ENST00000491747 CYP2B6P20813 491 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 PTPREP23469 700 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 GRK4P32298 578 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 SLC16A2P36021 539 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 ANAPC15P60006 121 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 CCNA1P78396 465 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 WDR78Q5VTH9 848 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-219ENST00000491747 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
BRCA1-219ENST00000491747 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
BRCA1-219ENST00000491747 CCDC39Q9UFE4 941 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 PLXNA1Q9UIW2 1896 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 BRCA2P51587 3418 aa10.92□□□□□ -0.66
BRCA1-219ENST00000491747 SNHG28P0DPA3 235 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 NT5C2P49902 561 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 STAT2P52630 851 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 SOX10P56693 466 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 MTFR1Q15390 333 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 CCAR1Q8IX12 1150 aaKnown RBP10.91□□□□□ -0.66
BRCA1-219ENST00000491747 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 SLC38A10Q9HBR0 1119 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 RAVER2Q9HCJ3 691 aaKnown RBP10.91□□□□□ -0.66
BRCA1-219ENST00000491747 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF536O15090 1300 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 PLA2G6O60733 806 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 BRD1O95696 1058 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 GOLGA8HP0CJ92 632 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 STAT3P40763 770 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 TRIM32Q13049 653 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 TRDNQ13061 729 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 CCL14Q16627 93 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 RIOX2Q8IUF8 465 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 SHCBP1Q8NEM2 672 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 MAP7D2Q96T17 732 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-219ENST00000491747 PRR12Q9ULL5 1215 aa10.91□□□□□ -0.66
BRCA1-219ENST00000491747 TAL1P17542 331 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-219ENST00000491747 ZNF543Q08ER8 600 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 CUL4AQ13619 759 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 GRB14Q14449 540 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 FAM160B2Q86V87 743 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 IGDCC4Q8TDY8 1250 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 PXYLP1Q8TE99 480 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 CHURC1Q8WUH1 139 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 TRIB2Q92519 343 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 UBAC1Q9BSL1 405 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 CPVLQ9H3G5 476 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
BRCA1-219ENST00000491747 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 SLC15A5A6NIM6 579 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 ZBED4O75132 1171 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 IKQ13123 557 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-219ENST00000491747 MAP2K5Q13163 448 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 ADCK5Q3MIX3 580 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 SNRNP48Q6IEG0 339 aaKnown RBP10.9□□□□□ -0.66
BRCA1-219ENST00000491747 RALYLQ86SE5 291 aaKnown RBP10.9□□□□□ -0.66
BRCA1-219ENST00000491747 NBPF11Q86T75 865 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 MROH8Q9H579 483 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 FLRT1Q9NZU1 646 aa10.9□□□□□ -0.66
BRCA1-219ENST00000491747 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
BRCA1-219ENST00000491747 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 COBLO75128 1261 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 INHAP05111 366 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
BRCA1-219ENST00000491747 SOCS4Q8WXH5 440 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 AGBL1Q96MI9 1066 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 ZMYND15Q9H091 742 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
BRCA1-219ENST00000491747 MYH6P13533 1939 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 SLC25A27O95847 323 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 ADORA2AP29274 412 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 CCDC174Q6PII3 467 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 TEX13BQ9BXU2 312 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
BRCA1-219ENST00000491747 LCTP09848 1927 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 EPB41L2O43491 1005 aaKnown RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 PRC1O43663 620 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 STRNO43815 780 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 XRCC5P13010 732 aaKnown RBP10.88□□□□□ -0.67
BRCA1-219ENST00000491747 RGS2P41220 211 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 TSGA10IPQ3SY00 556 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 KCNB2Q92953 911 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 PKNOX2Q96KN3 472 aa10.88□□□□□ -0.67
BRCA1-219ENST00000491747 UNC93B1Q9H1C4 597 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms