RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	GCFC2	P16383	781 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	EEF1G	P26641	437 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	TOB1	P50616	345 aa	Predicted RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	ETF1	P62495	437 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	PIP4K2B	P78356	416 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	PTGDR	Q13258	359 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	NCAPH	Q15003	741 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	PKN1	Q16512	942 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	TMEM266	Q2M3C6	531 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	COBLL1	Q53SF7	1204 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	ZNF658	Q5TYW1	1059 aa	Predicted RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	WWC2	Q6AWC2	1192 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	CC2D2B	Q6DHV5	1058 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	C16orf86	Q6ZW13	317 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	TMC6	Q7Z403	805 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	SH3RF1	Q7Z6J0	888 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	METTL16	Q86W50	562 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	TMTC1	Q8IUR5	882 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	CALML4	Q96GE6	196 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	DHTKD1	Q96HY7	919 aa	Predicted RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	BAG1	Q99933	345 aa	Predicted RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	ZKSCAN3	Q9BRR0	538 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	ZMYND12	Q9H0C1	365 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	CSRNP2	Q9H175	543 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	TMX1	Q9H3N1	280 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	MKRN1	Q9UHC7	482 aa	Known RBP	7.16	□□□□□ -1.26
FN1-223	ENST00000490833	NFE2L3	Q9Y4A8	694 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	PCDHB6	Q9Y5E3	794 aa		7.16	□□□□□ -1.26
FN1-223	ENST00000490833	PALM3	A6NDB9	673 aa	Predicted RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	AKR1B15	C9JRZ8	316 aa	Predicted RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	ACTN4	O43707	911 aa	Known RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	IPO7	O95373	1038 aa	Known RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	SERPINB2	P05120	415 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	NPR1	P16066	1061 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	ZNF18	P17022	549 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	RXRA	P19793	462 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	MCM3	P25205	808 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	LMOD1	P29536	600 aa	Predicted RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	NOV	P48745	357 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	MRPL12	P52815	198 aa	Known RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PSMD2	Q13200	908 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PNOC	Q13519	176 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	NR1I3	Q14994	352 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	NONO	Q15233	471 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	RRAGB	Q5VZM2	374 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	CNNM4	Q6P4Q7	775 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	HHIPL2	Q6UWX4	724 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PODN	Q7Z5L7	613 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	TEX11	Q8IYF3	940 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	SRBD1	Q8N5C6	995 aa	Known RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	EHBP1	Q8NDI1	1231 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	ZNF397	Q8NF99	534 aa	Predicted RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	RASSF8	Q8NHQ8	419 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	TNFRSF25	Q93038	417 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	TATDN2	Q93075	761 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PAGE5	Q96GU1	130 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PKNOX2	Q96KN3	472 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	MTR	Q99707	1265 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	MYL10	Q9BUA6	226 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	CCDC94	Q9BW85	323 aa	Predicted RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	CD209	Q9NNX6	404 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	VPS54	Q9P1Q0	977 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	SERTAD1	Q9UHV2	236 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	MAN1B1	Q9UKM7	699 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	PYCARD	Q9ULZ3	195 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	KCNJ14	Q9UNX9	436 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	TTF2	Q9UNY4	1162 aa	Known RBP	7.15	□□□□□ -1.26
FN1-223	ENST00000490833	CNTNAP5	Q8WYK1	1306 aa		7.15	□□□□□ -1.26
FN1-223	ENST00000490833	C10orf71	Q711Q0	1435 aa		7.15	□□□□□ -1.27
FN1-223	ENST00000490833	SCN7A	Q01118	1682 aa		7.15	□□□□□ -1.27
FN1-223	ENST00000490833	C4A	P0C0L4	1744 aa		7.15	□□□□□ -1.27
FN1-223	ENST00000490833	C4B	P0C0L5	1744 aa		7.15	□□□□□ -1.27
FN1-223	ENST00000490833		A0A1B0GTH6	734 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	PVALEF	A0A1B0GWK0	134 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833		A0A1W2PQC6	194 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	KLRF2	D3W0D1	207 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	BIN1	O00499	593 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	GAK	O14976	1311 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	UFL1	O94874	794 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	ABCB11	O95342	1321 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCDC175	P0C221	793 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	GUCY1A2	P33402	732 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	STAT6	P42226	847 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	DYNLL1	P63167	89 aa	Known RBP	7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCZ1B	P86790	482 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCZ1	P86791	482 aa	Predicted RBP	7.14	□□□□□ -1.27
FN1-223	ENST00000490833	DPYD	Q12882	1025 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	PAK1	Q13153	545 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	NR5A1	Q13285	461 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CHD4	Q14839	1912 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	NFIX	Q14938	502 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCDC88A	Q3V6T2	1871 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	NHS	Q6T4R5	1651 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	ADGRA1	Q86SQ6	560 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCDC84	Q86UT8	332 aa	Predicted RBP	7.14	□□□□□ -1.27
FN1-223	ENST00000490833	CCDC82	Q8N4S0	544 aa		7.14	□□□□□ -1.27
FN1-223	ENST00000490833	SUPT20H	Q8NEM7	779 aa		7.14	□□□□□ -1.27

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