RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 KSR2Q6VAB6 950 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 ATCAYQ86WG3 371 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 SPICE1Q8N0Z3 855 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 SYNPOQ8N3V7 929 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 ANKLE1Q8NAG6 615 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 MYRIPQ8NFW9 859 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TBC1D16Q8TBP0 767 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 OPTNQ96CV9 577 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 NBPF3Q9H094 633 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 PPCSQ9HAB8 311 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 PTPRHQ9HD43 1115 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TAGLN3Q9UI15 199 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 R3HCC1Q9Y3T6 440 aaKnown RBP5.37□□□□□ -1.55
RTN1-207ENST00000490111 MAP3K15Q6ZN16 1313 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 TTC28Q96AY4 2481 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 ANKRD36CQ5JPF3 1778 aa5.37□□□□□ -1.55
RTN1-207ENST00000490111 GIPC1O14908 333 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 PDPK1O15530 556 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 USP2O75604 605 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 SASH1O94885 1247 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 RASGRP1O95267 797 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 ANXA1P04083 346 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 U2AF1L5P0DN76 240 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 MYL6BP14649 208 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 IREB2P48200 963 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 RAB27AP51159 221 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 GTF2A2P52657 109 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 MRPS5P82675 430 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 U2AF1Q01081 240 aaKnown RBP eCLIP5.36□□□□□ -1.55
RTN1-207ENST00000490111 FOXK2Q01167 660 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 KCTD2Q14681 263 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 DDR2Q16832 855 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
RTN1-207ENST00000490111 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 PARP10Q53GL7 1025 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 FAM26DQ5JW98 314 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 KIF6Q6ZMV9 814 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 PODNQ7Z5L7 613 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 DRC7Q8IY82 874 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 CHPFQ8IZ52 775 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 TEX19Q8NA77 164 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 THAP3Q8WTV1 239 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 ANAPC16Q96DE5 110 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 EAF1Q96JC9 268 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 NEUROD6Q96NK8 337 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 UTP14AQ9BVJ6 771 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 DEFB129Q9H1M3 183 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 DNAJC25Q9H1X3 360 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 EPHX3Q9H6B9 360 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 C11orf49Q9H6J7 331 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 ELP3Q9H9T3 547 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 AS3MTQ9HBK9 375 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 PAK6Q9NQU5 681 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 MCM8Q9UJA3 840 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 CDV3Q9UKY7 258 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 CEMIPQ8WUJ3 1361 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 COL1A1P02452 1464 aaPredicted RBP5.36□□□□□ -1.55
RTN1-207ENST00000490111 LAMB2P55268 1798 aa5.36□□□□□ -1.55
RTN1-207ENST00000490111 COL4A1P02462 1669 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ADGRA2Q96PE1 1338 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 TMEM238LA0A1B0GVL6 79 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 SMAD7O15105 426 aaKnown RBP5.35□□□□□ -1.55
RTN1-207ENST00000490111 AKAP10O43572 662 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ADCY3O60266 1144 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ASMTLO95671 621 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 INHAP05111 366 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 CFHP08603 1231 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 USP17L7P0C7H9 530 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 PRKCZQ05513 592 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 USP4Q13107 963 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 COL9A2Q14055 689 aaPredicted RBP5.35□□□□□ -1.55
RTN1-207ENST00000490111 PTPRNQ16849 979 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 Q3C1V9 767 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 POTEEQ6S8J3 1075 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 C17orf99Q6UX52 265 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ARMC2Q8NEN0 867 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 MFSD3Q96ES6 412 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ARHGAP9Q9BRR9 750 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ASPSCR1Q9BZE9 553 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 RBSNQ9H1K0 784 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 ZCCHC17Q9NP64 241 aaKnown RBP5.35□□□□□ -1.55
RTN1-207ENST00000490111 ZIM2Q9NZV7 527 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 THEGQ9P2T0 379 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 FAM8A1Q9UBU6 413 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 PPP2R3BQ9Y5P8 575 aa5.35□□□□□ -1.55
RTN1-207ENST00000490111 PSME4Q14997 1843 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 PDGFAP04085 211 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 VDRP11473 427 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 PLCG2P16885 1265 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 PPP2R1AP30153 589 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 MMP14P50281 582 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 NEK2P51955 445 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 EPHA4P54764 986 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 SMAD3P84022 425 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms