RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GPR153Q6NV75 609 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 FAM160B2Q86V87 743 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ANKRD35Q8N283 1001 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CHURC1Q8WUH1 139 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 OSBPL3Q9H4L5 887 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 FBXO40Q9UH90 709 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CNPY2Q9Y2B0 182 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CTDP1Q9Y5B0 961 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 SNAP25P60880 206 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CNTN2Q02246 1040 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 NUCB1Q02818 461 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CCSAPQ6IQ19 270 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 SH3RF1Q7Z6J0 888 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CHD1LQ86WJ1 897 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 KLHDC9Q8NEP7 349 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 KATNBL1Q9H079 304 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ZMYM6O95789 1325 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 LCTP09848 1927 aa22.98■■□□□ 1.27
TNFRSF1B-202ENST00000489921 A0A0C4DFX4 3053 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 TRIM43BA6NCK2 446 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 IRX5P78411 483 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ACVR2BQ13705 512 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RNF180Q86T96 592 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 FAM133AQ8N9E0 248 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 TRIM43Q96BQ3 446 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 PDLIM7Q9NR12 457 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 HOMER2Q9NSB8 354 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 FAM184BQ9ULE4 1060 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 PRR12Q9ULL5 1215 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 SYNRGQ9UMZ2 1314 aa22.97■■□□□ 1.27
TNFRSF1B-202ENST00000489921 A0A1W2PQ45 241 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 A0A1W2PQY0 241 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 TRIM6-TRIM34B2RNG4 842 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 SDSP20132 328 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RILPL2Q969X0 211 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ACAD9Q9H845 621 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 A1CFQ9NQ94 594 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 TCP11L1Q9NUJ3 509 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CCDC171Q6TFL3 1326 aa22.96■■□□□ 1.27
TNFRSF1B-202ENST00000489921 MYADML2A6NDP7 307 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 SOWAHBA6NEL2 793 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ASTN1O14525 1302 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TLE2Q04725 743 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TTBK2Q6IQ55 1244 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ARMCX2Q7L311 632 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CCDC144CPQ8IYA2 1237 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TSEN34Q9BSV6 310 aaKnown RBP22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ABHD16BQ9H3Z7 469 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 RNF146Q9NTX7 359 aa22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ZHX1Q9UKY1 873 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF1B-202ENST00000489921 DUSP11O75319 330 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ITGB8P26012 769 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 HAND2P61296 217 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 IKQ13123 557 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CCDC144BQ3MJ40 725 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 MUM1L1Q5H9M0 696 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 BTNL9Q6UXG8 535 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 Q7L0L9 218 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TRERF1Q96PN7 1200 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 LBHD1Q9BQE6 289 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TMEM47Q9BQJ4 181 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ISY1Q9ULR0 285 aaKnown RBP22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 LRRC37A2A6NM11 1700 aa22.94■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ACLYP53396 1101 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 KCNA10Q16322 511 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TKFCQ3LXA3 575 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 RRP12Q5JTH9 1297 aaKnown RBP22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CCDC174Q6PII3 467 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TBC1D10CQ8IV04 446 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 DCAF4Q8WV16 495 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 BADQ92934 168 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 PRKAG2Q9UGJ0 569 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 MTMR7Q9Y216 660 aa22.93■■□□□ 1.26
TNFRSF1B-202ENST00000489921 LAMA4Q16363 1823 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 POTEB2H3BUK9 544 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CTAGE5O15320 804 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ALAS1P13196 640 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 DEFB123Q8N688 67 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 UPF3AQ9H1J1 476 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 RANBP17Q9H2T7 1088 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 PRDM5Q9NQX1 630 aaPredicted RBP22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TOMM22Q9NS69 142 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 DDX49Q9Y6V7 483 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CDH23Q9H251 3354 aa22.92■■□□□ 1.26
TNFRSF1B-202ENST00000489921 EYSQ5T1H1 3165 aa22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 TOP1P11387 765 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CST5P28325 142 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 SLC16A2P36021 539 aa22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 AKNAD1Q5T1N1 836 aa22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 CYP39A1Q9NYL5 469 aa22.91■■□□□ 1.26
TNFRSF1B-202ENST00000489921 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 MOXD2PA6NHM9 499 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ICAM1P05362 532 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 GJA9P57773 515 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 NKX3-2P78367 333 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 SHHQ15465 462 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 C9orf50Q5SZB4 431 aa22.9■■□□□ 1.26
TNFRSF1B-202ENST00000489921 ANKRD33Q7Z3H0 272 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms