RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SETQ01105 290 aaPredicted RBP11.08□□□□□ -0.64
NOD1-208ENST00000489614 PDE4BQ07343 736 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 DPF2Q92785 391 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 ITFG2Q969R8 447 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 NCOA5Q9HCD5 579 aaKnown RBP11.08□□□□□ -0.64
NOD1-208ENST00000489614 IFNAR1P17181 557 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 CCNHP51946 323 aaPredicted RBP11.08□□□□□ -0.64
NOD1-208ENST00000489614 RESTQ13127 1097 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 CPSF2Q9P2I0 782 aaKnown RBP11.08□□□□□ -0.64
NOD1-208ENST00000489614 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 ELP1O95163 1332 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 DDTLA6NHG4 134 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 AP1G2O75843 785 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CPP00450 1065 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 F13A1P00488 732 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 SNHG28P0DPA3 235 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 ADD1P35611 737 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 USP8P40818 1118 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CCZ1BP86790 482 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CCZ1P86791 482 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 WTAPQ15007 396 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 SLC35G1Q2M3R5 365 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 OTUD6BQ8N6M0 293 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 TNMDQ9H2S6 317 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 CD248Q9HCU0 757 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 EME2A4GXA9 379 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 GOLGA8BA8MQT2 603 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 F8W031 263 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 IFIT3O14879 490 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 NMT2O60551 498 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 NF2P35240 595 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CCT2P78371 535 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 PSMD2Q13200 908 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 AP1ARQ63HQ0 302 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 SAP30BPQ9UHR5 308 aaKnown RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 TBC1D12O60347 775 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 RAD17O75943 681 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 YBX3P16989 372 aaKnown RBP eCLIP11.07□□□□□ -0.64
NOD1-208ENST00000489614 TBC1D8BQ0IIM8 1120 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 PPP1R13BQ96KQ4 1090 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 PARD6BQ9BYG5 372 aa11.07□□□□□ -0.64
NOD1-208ENST00000489614 ZNF70Q9UC06 446 aaPredicted RBP11.07□□□□□ -0.64
NOD1-208ENST00000489614 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 ZBTB43O43298 467 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 RDXP35241 583 aaKnown RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 PEX19P40855 299 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 STK3Q13188 491 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 LONRF2Q1L5Z9 754 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 ZKSCAN3Q9BRR0 538 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 SYT17Q9BSW7 474 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 PRDM1O75626 825 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 SNX1Q13596 522 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 NEDD9Q14511 834 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 GRM4Q14833 912 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 PKN1Q16512 942 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 TTC6Q86TZ1 520 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 CNNM3Q8NE01 707 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 TEPSINQ96N21 525 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 RPS6KL1Q9Y6S9 549 aa11.06□□□□□ -0.64
NOD1-208ENST00000489614 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
NOD1-208ENST00000489614 A0A087WWV3 80 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 TADA3O75528 432 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 METAP2P50579 478 aaKnown RBP eCLIP11.05□□□□□ -0.64
NOD1-208ENST00000489614 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
NOD1-208ENST00000489614 TNIP1Q15025 636 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 JAKMIP3Q5VZ66 844 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 SIAH1Q8IUQ4 282 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 FANCBQ8NB91 859 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 SUGCTQ9HAC7 445 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 MAD2L2Q9UI95 211 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 BCS1LQ9Y276 419 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 IPO7O95373 1038 aaKnown RBP11.05□□□□□ -0.64
NOD1-208ENST00000489614 TFAP4Q01664 338 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
NOD1-208ENST00000489614 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms