RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 SAMD7Q7Z3H4 446 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 CKAP2LQ8IYA6 745 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 CABP5Q9NP86 173 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 PI4KBQ9UBF8 816 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 RCOR1Q9UKL0 485 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 POLR3GO15318 223 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 KIF5BP33176 963 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 SEPT2Q15019 361 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 BRAPQ7Z569 592 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 NOSTRINQ8IVI9 506 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 ERCC4Q92889 916 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 SAFBQ15424 915 aaKnown RBP eCLIP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 CERKLQ49MI3 558 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 ANO1Q5XXA6 986 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 HEATR3Q7Z4Q2 680 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 CCAR1Q8IX12 1150 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 ANKS1AQ92625 1134 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 MRIQ9BWK5 157 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 AP5Z1O43299 807 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 SCG2P13521 617 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 PTGS1P23219 599 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 SLC16A2P36021 539 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 TOB1P50616 345 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 TTBK2Q6IQ55 1244 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 CLIC6Q96NY7 704 aa20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-205ENST00000489144 PSME4Q14997 1843 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 A0A1B0GVL5 298 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 PARP1P09874 1014 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 TPD52L1Q16890 204 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 TBC1D10BQ4KMP7 808 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 SPECC1Q5M775 1068 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 CCDC183Q5T5S1 534 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 RPAINQ86UA6 219 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 RTEL1Q9NZ71 1219 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 A0A087WWV3 80 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 WNT10BO00744 389 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 CCDC84Q86UT8 332 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 TMOD2Q9NZR1 351 aa20.61■□□□□ 0.89
POLR2J3-205ENST00000489144 PDHBP11177 359 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 PHF20Q9BVI0 1012 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 SWAP70Q9UH65 585 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 PCDHB6Q9Y5E3 794 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 ZNF541Q9H0D2 1346 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 PALM3A6NDB9 673 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 SPTLC2O15270 562 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 GMPSP49915 693 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 NLRP5P59047 1200 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 NPY5RQ15761 445 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 MYOZ2Q9NPC6 264 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 MYO3BQ8WXR4 1341 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 CNTNAP1P78357 1384 aa20.6■□□□□ 0.89
POLR2J3-205ENST00000489144 IGKV6D-41A0A0C4DH26 115 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 TTLL1O95922 423 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 GH2P01242 217 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 EEF2P13639 858 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 PPP2R5BQ15173 497 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 PFKFB3Q16875 520 aaPredicted RBP20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 WWC2Q6AWC2 1192 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 FSIP1Q8NA03 581 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 ZNF592Q92610 1267 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 NUP88Q99567 741 aaPredicted RBP20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 DHX36Q9H2U1 1008 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 GRIN1Q05586 938 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 MMS22LQ6ZRQ5 1243 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 PIGSQ96S52 555 aa20.59■□□□□ 0.89
POLR2J3-205ENST00000489144 KIF3CO14782 793 aa20.58■□□□□ 0.89
POLR2J3-205ENST00000489144 SLU7O95391 586 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-205ENST00000489144 SSR1P43307 286 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-205ENST00000489144 MICALL2Q8IY33 904 aa20.58■□□□□ 0.89
POLR2J3-205ENST00000489144 KRT2P35908 639 aa20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 SPDYE2Q495Y8 402 aa20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 MAP3K14Q99558 947 aa20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 POLR3EQ9NVU0 708 aa20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 PSD3Q9NYI0 1048 aa20.58■□□□□ 0.88
POLR2J3-205ENST00000489144 CLCN6P51797 869 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 SNAP25P60880 206 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 CCDC178Q5BJE1 867 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 EHD4Q9H223 541 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 FZD1Q9UP38 647 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 XBP1P17861 261 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 PRAMEF18Q5VWM3 479 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 PIK3AP1Q6ZUJ8 805 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 SPICE1Q8N0Z3 855 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 AGBL3Q8NEM8 1001 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 UBXN6Q9BZV1 441 aa20.57■□□□□ 0.88
POLR2J3-205ENST00000489144 TAL1P17542 331 aaPredicted RBP20.56■□□□□ 0.88
POLR2J3-205ENST00000489144 NDUFA8P51970 172 aa20.56■□□□□ 0.88
POLR2J3-205ENST00000489144 ABCB5Q2M3G0 1257 aa20.56■□□□□ 0.88
POLR2J3-205ENST00000489144 SIAH1Q8IUQ4 282 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms