RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
CXCL12-207ENST00000488591 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
CXCL12-207ENST00000488591 ICAM1P05362 532 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 ALAS1P13196 640 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 CCL5P13501 91 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 SNAP25P60880 206 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 MTFR1Q15390 333 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 MFSD14CQ5VZR4 134 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 UBA5Q9GZZ9 404 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 HOMER2Q9NSB8 354 aa17.57■□□□□ 0.4
CXCL12-207ENST00000488591 ZNF236Q9UL36 1845 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 ZNF536O15090 1300 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 LIFRP42702 1097 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 CCL14Q16627 93 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
CXCL12-207ENST00000488591 NPLOC4Q8TAT6 608 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 KCNB2Q92953 911 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 HMX1Q9NP08 348 aaPredicted RBP17.56■□□□□ 0.4
CXCL12-207ENST00000488591 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
CXCL12-207ENST00000488591 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
CXCL12-207ENST00000488591 RPTORQ8N122 1335 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
CXCL12-207ENST00000488591 COBLO75128 1261 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 GRM4Q14833 912 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 OLFML2BQ68BL8 750 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 SENP2Q9HC62 589 aa17.55■□□□□ 0.4
CXCL12-207ENST00000488591 DIS3Q9Y2L1 958 aaKnown RBP17.55■□□□□ 0.4
CXCL12-207ENST00000488591 PALM3A6NDB9 673 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 DDAH1O94760 285 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 PGK2P07205 417 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 GJB1P08034 283 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 CALM1P0DP23 149 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 CALM2P0DP24 149 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 CALM3P0DP25 149 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 PSMA5P28066 241 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 KIF5BP33176 963 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 FGD1P98174 961 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 TROAPQ12815 778 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
CXCL12-207ENST00000488591 MAP3K14Q99558 947 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 USP26Q9BXU7 913 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 HTTP42858 3142 aa17.54■□□□□ 0.4
CXCL12-207ENST00000488591 POTEFA5A3E0 1075 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 CAPN2P17655 700 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
CXCL12-207ENST00000488591 CACNB2Q08289 660 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-207ENST00000488591 TRIM32Q13049 653 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 ZNF792Q3KQV3 632 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
CXCL12-207ENST00000488591 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
CXCL12-207ENST00000488591 FLRT1Q9NZU1 646 aa17.53■□□□□ 0.4
CXCL12-207ENST00000488591 PFASO15067 1338 aa17.52■□□□□ 0.4
CXCL12-207ENST00000488591 RGS19P49795 217 aa17.52■□□□□ 0.4
CXCL12-207ENST00000488591 GNAQP50148 359 aa17.52■□□□□ 0.4
CXCL12-207ENST00000488591 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
CXCL12-207ENST00000488591 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
CXCL12-207ENST00000488591 JMJD4Q9H9V9 463 aa17.52■□□□□ 0.4
CXCL12-207ENST00000488591 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
CXCL12-207ENST00000488591 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-207ENST00000488591 CYP2C19P33261 490 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 GJA8P48165 433 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 TRAF1Q13077 416 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 MUM1L1Q5H9M0 696 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 MSL3Q8N5Y2 521 aaKnown RBP17.51■□□□□ 0.39
CXCL12-207ENST00000488591 LZTS2Q9BRK4 669 aa17.51■□□□□ 0.39
CXCL12-207ENST00000488591 A1CFQ9NQ94 594 aaKnown RBP17.51■□□□□ 0.39
CXCL12-207ENST00000488591 PAK6Q9NQU5 681 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-207ENST00000488591 POTEB2H3BUK9 544 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 SGPL1O95470 568 aa17.5■□□□□ 0.39
CXCL12-207ENST00000488591 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms