RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 DGKZQ13574 1117 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 MOGSQ13724 837 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 STK38Q15208 465 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 ANO1Q5XXA6 986 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 LRSAM1Q6UWE0 723 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 BICD2Q8TD16 824 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 PHF20Q9BVI0 1012 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 BRMS1Q9HCU9 246 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 CASP8AP2Q9UKL3 1982 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 SYCE3A1L190 88 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 BTBD18B2RXH4 712 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 TTLL1O95922 423 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 PARP1P09874 1014 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 JAG1P78504 1218 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 GADL1Q6ZQY3 521 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
POLR2J3-204ENST00000486319 GH2P01242 217 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 KRT2P35908 639 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 ME1P48163 572 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 RILPL1Q5EBL4 403 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 CTU1Q7Z7A3 348 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 GAS2L3Q86XJ1 694 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 FAM177A1Q8N128 213 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 DDX19AQ9NUU7 478 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 ZBTB21Q9ULJ3 1066 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 KLRF2D3W0D1 207 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 MPHOSPH10O00566 681 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 SPTLC2O15270 562 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 TLR2O60603 784 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 SP3Q02447 781 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 SPZ1Q9BXG8 430 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
POLR2J3-204ENST00000486319 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 LIG1P18858 919 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 SLC39A14Q15043 492 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 ASPRV1Q53RT3 343 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
POLR2J3-204ENST00000486319 A0A1W2PQ27 194 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 A0A1W2PQ64 194 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 A0A1W2PQD8 194 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 PPP6R2O75170 966 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 CALML3P27482 149 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 HMGCS2P54868 508 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 NUP62CLQ9H1M0 184 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
POLR2J3-204ENST00000486319 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 SNHG28P0DPA3 235 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 PDHBP11177 359 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 BACE1P56817 501 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 NLRP5P59047 1200 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 MTMR2Q13614 643 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 PKN2Q16513 984 aaKnown RBP16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 CCDC148Q8NFR7 591 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 SLC45A1Q9Y2W3 748 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 DOCK1Q14185 1865 aa16.72■□□□□ 0.27
POLR2J3-204ENST00000486319 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 CYTH3O43739 400 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 GOLGA8HP0CJ92 632 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 CYP2C8P10632 490 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 NR5A1Q13285 461 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 SH3D19Q5HYK7 790 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 GALNT17Q6IS24 598 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 USP17L2Q6R6M4 530 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 MKL1Q969V6 931 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 NYAP2Q9P242 653 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 CEP131Q9UPN4 1083 aa16.71■□□□□ 0.27
POLR2J3-204ENST00000486319 CAPN15O75808 1086 aa16.7■□□□□ 0.26
POLR2J3-204ENST00000486319 PTPAQ15257 358 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms