RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 B4GALT4O60513 344 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 CYP7A1P22680 504 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 USP5P45974 858 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 KCTD2Q14681 263 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 HFE2Q6ZVN8 426 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 ITPRIPQ8IWB1 547 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
SND1-213ENST00000486037 GDPD5Q8WTR4 605 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 MEIS3Q99687 375 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
SND1-213ENST00000486037 ZNF214Q9UL59 606 aaPredicted RBP11.9□□□□□ -0.5
SND1-213ENST00000486037 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.5
SND1-213ENST00000486037 ZDBF2Q9HCK1 2354 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
SND1-213ENST00000486037 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
SND1-213ENST00000486037 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
SND1-213ENST00000486037 ZAP70P43403 619 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 ACVR2BQ13705 512 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 PTPRSQ13332 1948 aa11.89□□□□□ -0.51
SND1-213ENST00000486037 DNAJC25-GNG10A0A024R161 153 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.88□□□□□ -0.51
SND1-213ENST00000486037 LCHNA4D1U4 455 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 STAT3P40763 770 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 PSMC6P62333 389 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 CCDC136Q96JN2 1154 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
SND1-213ENST00000486037 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
SND1-213ENST00000486037 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 VWA5AO00534 786 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 DCXO43602 365 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 CYP2D6P10635 497 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 ALADP13716 330 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 KCNA5P22460 613 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 LEXMQ3ZCV2 418 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
SND1-213ENST00000486037 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
SND1-213ENST00000486037 KCNH6Q9H252 994 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
SND1-213ENST00000486037 NAV1Q8NEY1 1877 aa11.87□□□□□ -0.51
SND1-213ENST00000486037 TET1Q8NFU7 2136 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 CYP2C9P11712 490 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 AKR1B1P15121 316 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 NKX3-2P78367 333 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 AAMPQ13685 434 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 TMEM63BQ5T3F8 832 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 IER5LQ5T953 404 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
SND1-213ENST00000486037 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
SND1-213ENST00000486037 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 TMX2Q9Y320 296 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
SND1-213ENST00000486037 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
SND1-213ENST00000486037 ST18O60284 1047 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 ARMCX2Q7L311 632 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 PPP1R13LQ8WUF5 828 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
SND1-213ENST00000486037 PPP1R9AQ9ULJ8 1098 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 SPTBN4Q9H254 2564 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 TECTAO75443 2155 aa11.85□□□□□ -0.51
SND1-213ENST00000486037 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 GRXCR2A6NFK2 248 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
SND1-213ENST00000486037 ICA1Q05084 483 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 MTX1Q13505 466 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 SLC9A7Q96T83 725 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
SND1-213ENST00000486037 ABHD16BQ9H3Z7 469 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
SND1-213ENST00000486037 MTUS1Q9ULD2 1270 aa11.84□□□□□ -0.51
SND1-213ENST00000486037 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
SND1-213ENST00000486037 VPS13AQ96RL7 3174 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 H3BQ06 376 aaPredicted RBP11.83□□□□□ -0.52
SND1-213ENST00000486037 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
SND1-213ENST00000486037 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
SND1-213ENST00000486037 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms