RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CYP2B6P20813 491 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 PTPREP23469 700 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 OAZ1P54368 228 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 SOCS4Q8WXH5 440 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 BRF1Q92994 677 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 ZNF536O15090 1300 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
HPS4-214ENST00000485842 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
HPS4-214ENST00000485842 SLC15A5A6NIM6 579 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 ADCY3O60266 1144 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 ICAM1P05362 532 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 KIF5BP33176 963 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 RGS2P41220 211 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 ANAPC15P60006 121 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
HPS4-214ENST00000485842 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 MORN1Q5T089 497 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 MMP19Q99542 508 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
HPS4-214ENST00000485842 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 CALM1P0DP23 149 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 CALM2P0DP24 149 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 CALM3P0DP25 149 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 FCER1AP12319 257 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 ELNP15502 786 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 ADORA2AP29274 412 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 GRK4P32298 578 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 IRF5Q13568 498 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 GRB14Q14449 540 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 KCTD2Q14681 263 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 USH1GQ495M9 461 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 APBA2Q99767 749 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
HPS4-214ENST00000485842 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
HPS4-214ENST00000485842 SMCHD1A6NHR9 2005 aa13.78□□□□□ -0.2
HPS4-214ENST00000485842 GOLGA8AA7E2F4 631 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 ZBTB43O43298 467 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 STRNO43815 780 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
HPS4-214ENST00000485842 PGK2P07205 417 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 TKFCQ3LXA3 575 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 USP6NLQ92738 828 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 MAP3K14Q99558 947 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
HPS4-214ENST00000485842 BAZ2BQ9UIF8 2168 aaKnown RBP13.77□□□□□ -0.21
HPS4-214ENST00000485842 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 CCL14Q16627 93 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 RTN1Q16799 776 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
HPS4-214ENST00000485842 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 NPLOC4Q8TAT6 608 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 PIGSQ96S52 555 aa13.76□□□□□ -0.21
HPS4-214ENST00000485842 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
HPS4-214ENST00000485842 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
HPS4-214ENST00000485842 ZBTB5O15062 677 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 CYTH3O43739 400 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 COBLO75128 1261 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 GNAQP50148 359 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
HPS4-214ENST00000485842 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
HPS4-214ENST00000485842 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 CCDC82Q8N4S0 544 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
HPS4-214ENST00000485842 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 TRIB2Q92519 343 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms