RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 BRCA2P51587 3418 aa19■□□□□ 0.63
DDR1-246ENST00000485023 PRC1O43663 620 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 GJB1P08034 283 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 FDX1P10109 184 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 WTAPQ15007 396 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 SART3Q15020 963 aaKnown RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 MFSD14CQ5VZR4 134 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 BTNL9Q6UXG8 535 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 ABRAQ8N0Z2 381 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 U2AF1L4Q8WU68 220 aaKnown RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 RANBP17Q9H2T7 1088 aaKnown RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 HMX1Q9NP08 348 aaPredicted RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 GPHNQ9NQX3 736 aaPredicted RBP18.99■□□□□ 0.63
DDR1-246ENST00000485023 RPTORQ8N122 1335 aa18.99■□□□□ 0.63
DDR1-246ENST00000485023 DHX16O60231 1041 aaKnown RBP18.98■□□□□ 0.63
DDR1-246ENST00000485023 PARP1P09874 1014 aaKnown RBP18.98■□□□□ 0.63
DDR1-246ENST00000485023 GPATCH4Q5T3I0 446 aaKnown RBP18.98■□□□□ 0.63
DDR1-246ENST00000485023 MAP3K21Q5TCX8 1036 aa18.98■□□□□ 0.63
DDR1-246ENST00000485023 ANKRD35Q8N283 1001 aa18.98■□□□□ 0.63
DDR1-246ENST00000485023 DDX11Q96FC9 970 aa18.98■□□□□ 0.63
DDR1-246ENST00000485023 MAML3Q96JK9 1138 aa18.98■□□□□ 0.63
DDR1-246ENST00000485023 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
DDR1-246ENST00000485023 SLC5A4Q9NY91 659 aa18.98■□□□□ 0.63
DDR1-246ENST00000485023 GJA8P48165 433 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 ASPRV1Q53RT3 343 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 RASEFQ8IZ41 740 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 CHST13Q8NET6 341 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 TRERF1Q96PN7 1200 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 LRRC2Q9BYS8 371 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 ACAD9Q9H845 621 aa18.97■□□□□ 0.63
DDR1-246ENST00000485023 ICAM1P05362 532 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 CNGA1P29973 690 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 MCM5P33992 734 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 STAG2Q8N3U4 1231 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 MYL10Q9BUA6 226 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 VAT1LQ9HCJ6 419 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 FBXO40Q9UH90 709 aa18.96■□□□□ 0.63
DDR1-246ENST00000485023 PDE4DIPQ5VU43 2346 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 SGPL1O95470 568 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 TFRCP02786 760 aaKnown RBP18.95■□□□□ 0.62
DDR1-246ENST00000485023 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
DDR1-246ENST00000485023 ZNF792Q3KQV3 632 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 USH1GQ495M9 461 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 PRAMEF19Q5SWL8 479 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 OLFML2BQ68BL8 750 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 NFXL1Q6ZNB6 911 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 IGDCC4Q8TDY8 1250 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 NUP133Q8WUM0 1156 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 LY9Q9HBG7 655 aa18.95■□□□□ 0.62
DDR1-246ENST00000485023 A1CFQ9NQ94 594 aaKnown RBP18.95■□□□□ 0.62
DDR1-246ENST00000485023 SH2B2O14492 632 aaPredicted RBP18.94■□□□□ 0.62
DDR1-246ENST00000485023 TKFCQ3LXA3 575 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 ADCK5Q3MIX3 580 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 NSMFQ6X4W1 530 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 CATIPQ7Z7H3 387 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 RAB11FIP4Q86YS3 637 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 TRPV1Q8NER1 839 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 NEK1Q96PY6 1258 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 MAD2L2Q9UI95 211 aa18.94■□□□□ 0.62
DDR1-246ENST00000485023 NFIBO00712 420 aa18.93■□□□□ 0.62
DDR1-246ENST00000485023 REC8O95072 547 aa18.93■□□□□ 0.62
DDR1-246ENST00000485023 GRM4Q14833 912 aa18.93■□□□□ 0.62
DDR1-246ENST00000485023 ANO1Q5XXA6 986 aa18.93■□□□□ 0.62
DDR1-246ENST00000485023 DNAJC25-GNG10A0A024R161 153 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 CYBAP13498 195 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 RXRAP19793 462 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 CNTN2Q02246 1040 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 TINF2Q9BSI4 451 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 JMJD4Q9H9V9 463 aa18.92■□□□□ 0.62
DDR1-246ENST00000485023 PLXNA1Q9UIW2 1896 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 PALM3A6NDB9 673 aaPredicted RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 FARP2O94887 1054 aaPredicted RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 IGHA2P01877 340 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 CPA1P15085 419 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 HSPA4P34932 840 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 TROAPQ12815 778 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 QRICH1Q2TAL8 776 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDR1-246ENST00000485023 HOMER1Q86YM7 354 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 CCDC144CPQ8IYA2 1237 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 FGD4Q96M96 766 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 JAKMIP1Q96N16 626 aaKnown RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 PURBQ96QR8 312 aaKnown RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 CRISPLD2Q9H0B8 497 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 DIS3Q9Y2L1 958 aaKnown RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 SNX14Q9Y5W7 946 aa18.91■□□□□ 0.62
DDR1-246ENST00000485023 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
DDR1-246ENST00000485023 KIAA0100Q14667 2235 aaKnown RBP18.9■□□□□ 0.62
DDR1-246ENST00000485023 PTPDC1A2A3K4 754 aa18.9■□□□□ 0.62
DDR1-246ENST00000485023 KRT32Q14532 448 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms