RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 SNX17Q15036 470 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 ZPBP2Q6X784 338 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 DPH6Q7L8W6 267 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 FAM178BQ8IXR5 827 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 NFIBO00712 420 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 FKTNO75072 461 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 USP2O75604 605 aaPredicted RBP10.02□□□□□ -0.81
UBR3-210ENST00000484596 TMEM253P0C7T8 217 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 SERINC3Q13530 473 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 AUHQ13825 339 aaKnown RBP10.02□□□□□ -0.81
UBR3-210ENST00000484596 ANKLE2Q86XL3 938 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
UBR3-210ENST00000484596 MAP6Q96JE9 813 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 GFOD1Q9NXC2 390 aa10.02□□□□□ -0.81
UBR3-210ENST00000484596 EFEMP2O95967 443 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 NAT2P11245 290 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 ANKRD39Q53RE8 183 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 KIAA1211LQ6NV74 962 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 C6orf15Q6UXA7 325 aaPredicted RBP10.01□□□□□ -0.81
UBR3-210ENST00000484596 CCDC144CPQ8IYA2 1237 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 TOX2Q96NM4 488 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 SLC26A8Q96RN1 970 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 FBXL21Q9UKT6 434 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 PCDHB12Q9Y5F1 795 aa10.01□□□□□ -0.81
UBR3-210ENST00000484596 C9IYK1 514 aa10□□□□□ -0.81
UBR3-210ENST00000484596 MEIS1O00470 390 aa10□□□□□ -0.81
UBR3-210ENST00000484596 CFPP27918 469 aa10□□□□□ -0.81
UBR3-210ENST00000484596 ZNF143P52747 638 aaPredicted RBP10□□□□□ -0.81
UBR3-210ENST00000484596 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
UBR3-210ENST00000484596 SIRT2Q8IXJ6 389 aa10□□□□□ -0.81
UBR3-210ENST00000484596 KCNN1Q92952 543 aa10□□□□□ -0.81
UBR3-210ENST00000484596 HHIPL1Q96JK4 782 aa10□□□□□ -0.81
UBR3-210ENST00000484596 ST7Q9NRC1 585 aa10□□□□□ -0.81
UBR3-210ENST00000484596 ETV2O00321 342 aaPredicted RBP9.99□□□□□ -0.81
UBR3-210ENST00000484596 GJB6O95452 261 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 KIR2DL1P43626 348 aaPredicted RBP9.99□□□□□ -0.81
UBR3-210ENST00000484596 KIR2DL2P43627 348 aaPredicted RBP9.99□□□□□ -0.81
UBR3-210ENST00000484596 TCEAL1Q15170 157 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 EEPD1Q7L9B9 569 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 KLHL6Q8WZ60 621 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 ZSWIM4Q9H7M6 989 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 PCDHB10Q9UN67 800 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
UBR3-210ENST00000484596 TP53P04637 393 aaPredicted RBP9.98□□□□□ -0.81
UBR3-210ENST00000484596 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 PDE6BP35913 854 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 CTSKP43235 329 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 SLC14A2Q15849 920 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 SPOCD1Q6ZMY3 1216 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 ATG14Q6ZNE5 492 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 CEP128Q6ZU80 1094 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 ZNF605Q86T29 641 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 NLRX1Q86UT6 975 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 PPFIBP1Q86W92 1011 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 C7orf61Q8IZ16 206 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 EPN3Q9H201 632 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 PRR13Q9NZ81 148 aa9.98□□□□□ -0.81
UBR3-210ENST00000484596 NRDCO43847 1150 aa9.97□□□□□ -0.81
UBR3-210ENST00000484596 GLDCP23378 1020 aa9.97□□□□□ -0.81
UBR3-210ENST00000484596 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
UBR3-210ENST00000484596 HEATR6Q6AI08 1181 aaKnown RBP9.97□□□□□ -0.81
UBR3-210ENST00000484596 LRRC56Q8IYG6 542 aaPredicted RBP9.97□□□□□ -0.81
UBR3-210ENST00000484596 MRFAP1L1Q96HT8 127 aa9.97□□□□□ -0.81
UBR3-210ENST00000484596 SRPK1Q96SB4 655 aaKnown RBP9.97□□□□□ -0.81
UBR3-210ENST00000484596 MCOLN1Q9GZU1 580 aa9.97□□□□□ -0.81
UBR3-210ENST00000484596 ZNF552Q9H707 407 aaPredicted RBP9.97□□□□□ -0.81
UBR3-210ENST00000484596 CD320Q9NPF0 282 aa9.97□□□□□ -0.81
UBR3-210ENST00000484596 MYOCOSA0A1B0GUC4 107 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 ANKRD34BA5PLL1 514 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 SHOXO15266 292 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 PDPK1O15530 556 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 AXDND1Q5T1B0 1012 aaPredicted RBP9.96□□□□□ -0.82
UBR3-210ENST00000484596 ST13P5Q8NFI4 369 aaPredicted RBP9.96□□□□□ -0.82
UBR3-210ENST00000484596 MICAL1Q8TDZ2 1067 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 DEPDC7Q96QD5 511 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 HAUS7Q99871 368 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 GBP3Q9H0R5 595 aa9.96□□□□□ -0.82
UBR3-210ENST00000484596 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.82
UBR3-210ENST00000484596 TCAF2A6NFQ2 919 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 BMP8BP34820 402 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 RTP1P59025 263 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 CRTC3Q6UUV7 619 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
UBR3-210ENST00000484596 ZNF669Q96BR6 464 aaPredicted RBP9.95□□□□□ -0.82
UBR3-210ENST00000484596 FCRL2Q96LA5 508 aaPredicted RBP9.95□□□□□ -0.82
UBR3-210ENST00000484596 APBA2Q99767 749 aa9.95□□□□□ -0.82
UBR3-210ENST00000484596 SMG5Q9UPR3 1016 aaKnown RBP9.95□□□□□ -0.82
UBR3-210ENST00000484596 PEX10O60683 326 aa9.94□□□□□ -0.82
UBR3-210ENST00000484596 ZNF205O95201 554 aa9.94□□□□□ -0.82
UBR3-210ENST00000484596 VAV1P15498 845 aa9.94□□□□□ -0.82
UBR3-210ENST00000484596 CD247P20963 164 aa9.94□□□□□ -0.82
UBR3-210ENST00000484596 KCNA10Q16322 511 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms