RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 HMGCRP04035 888 aa30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 PARP1P09874 1014 aaKnown RBP30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 ZKSCAN1P17029 563 aaPredicted RBP30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 ASPRV1Q53RT3 343 aa30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 ABRAQ8N0Z2 381 aa30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 STAG2Q8N3U4 1231 aa30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 HOMER2Q9NSB8 354 aa30.98■■■□□ 2.55
GTF3C4-202ENST00000483873 POTEFA5A3E0 1075 aa30.97■■■□□ 2.55
GTF3C4-202ENST00000483873 SH2B2O14492 632 aaPredicted RBP30.97■■■□□ 2.55
GTF3C4-202ENST00000483873 UBXN2AP68543 259 aa30.97■■■□□ 2.55
GTF3C4-202ENST00000483873 FLRT1Q9NZU1 646 aa30.97■■■□□ 2.55
GTF3C4-202ENST00000483873 SNX14Q9Y5W7 946 aa30.97■■■□□ 2.55
GTF3C4-202ENST00000483873 HOXC6P09630 235 aa30.96■■■□□ 2.55
GTF3C4-202ENST00000483873 DPP9Q86TI2 863 aa30.96■■■□□ 2.55
GTF3C4-202ENST00000483873 TMEM87BQ96K49 555 aa30.96■■■□□ 2.55
GTF3C4-202ENST00000483873 TCEANC2Q96MN5 208 aa30.96■■■□□ 2.55
GTF3C4-202ENST00000483873 CCL5P13501 91 aa30.95■■■□□ 2.54
GTF3C4-202ENST00000483873 KRT32Q14532 448 aa30.95■■■□□ 2.54
GTF3C4-202ENST00000483873 MTA3Q9BTC8 594 aa30.95■■■□□ 2.54
GTF3C4-202ENST00000483873 UNC93B1Q9H1C4 597 aa30.95■■■□□ 2.54
GTF3C4-202ENST00000483873 MAD2L2Q9UI95 211 aa30.95■■■□□ 2.54
GTF3C4-202ENST00000483873 PGK2P07205 417 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 ALAS1P13196 640 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 TROAPQ12815 778 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 KCTD2Q14681 263 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 USP26Q9BXU7 913 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 CCPG1Q9ULG6 757 aa30.94■■■□□ 2.54
GTF3C4-202ENST00000483873 ICAM1P05362 532 aa30.93■■■□□ 2.54
GTF3C4-202ENST00000483873 GRM4Q14833 912 aa30.93■■■□□ 2.54
GTF3C4-202ENST00000483873 CHST13Q8NET6 341 aa30.93■■■□□ 2.54
GTF3C4-202ENST00000483873 MYL10Q9BUA6 226 aa30.93■■■□□ 2.54
GTF3C4-202ENST00000483873 RNF146Q9NTX7 359 aa30.93■■■□□ 2.54
GTF3C4-202ENST00000483873 EXOSC10Q01780 885 aaKnown RBP30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 CATIPQ7Z7H3 387 aa30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 TRMT44Q8IYL2 757 aaKnown RBP30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 ADGRF4Q8IZF3 695 aa30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 ZNF654Q8IZM8 581 aa30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 TRERF1Q96PN7 1200 aa30.92■■■□□ 2.54
GTF3C4-202ENST00000483873 PALM3A6NDB9 673 aaPredicted RBP30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 EPB41L2O43491 1005 aaKnown RBP30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 CPA1P15085 419 aa30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 MUM1L1Q5H9M0 696 aa30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 JAKMIP1Q96N16 626 aaKnown RBP30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 TMEM106CQ9BVX2 250 aa30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 RNF208Q9H0X6 261 aa30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 LCTP09848 1927 aa30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 BAZ2BQ9UIF8 2168 aaKnown RBP30.91■■■□□ 2.54
GTF3C4-202ENST00000483873 KLRF2D3W0D1 207 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 NFXL1Q6ZNB6 911 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 DHX32Q7L7V1 743 aaKnown RBP30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 NUP133Q8WUM0 1156 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 ACAD9Q9H845 621 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 FBXO40Q9UH90 709 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 PRKAR2AP13861 404 aaKnown RBP30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 LIFRP42702 1097 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 CACNB2Q08289 660 aaPredicted RBP30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 SLC35G1Q2M3R5 365 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 TKFCQ3LXA3 575 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 MAP3K21Q5TCX8 1036 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 MAML3Q96JK9 1138 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 VAT1LQ9HCJ6 419 aa30.9■■■□□ 2.54
GTF3C4-202ENST00000483873 WDR19Q8NEZ3 1342 aa30.89■■■□□ 2.54
GTF3C4-202ENST00000483873 CCDC69A6NI79 296 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 DHX16O60231 1041 aaKnown RBP30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 CYP2C19P33261 490 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 CDC37Q16543 378 aaPredicted RBP30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 ZNF792Q3KQV3 632 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 ANKRD35Q8N283 1001 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 DDX11Q96FC9 970 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 JMJD4Q9H9V9 463 aa30.89■■■□□ 2.53
GTF3C4-202ENST00000483873 DNAJC25-GNG10A0A024R161 153 aa30.88■■■□□ 2.53
GTF3C4-202ENST00000483873 IGHA2P01877 340 aa30.88■■■□□ 2.53
GTF3C4-202ENST00000483873 EN2P19622 333 aaPredicted RBP30.88■■■□□ 2.53
GTF3C4-202ENST00000483873 RAB11FIP4Q86YS3 637 aa30.88■■■□□ 2.53
GTF3C4-202ENST00000483873 SLC5A4Q9NY91 659 aa30.88■■■□□ 2.53
GTF3C4-202ENST00000483873 MCM3APO60318 1980 aa30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 DDAH1O94760 285 aa30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 RXRAP19793 462 aa30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 OLFML2BQ68BL8 750 aa30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 TMTC2Q8N394 836 aa30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.87■■■□□ 2.535e-6■■□□□ 13
GTF3C4-202ENST00000483873 A1CFQ9NQ94 594 aaKnown RBP30.87■■■□□ 2.53
GTF3C4-202ENST00000483873 FRMPD3Q5JV73 1810 aa30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 QRICH1Q2TAL8 776 aa30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 USH1GQ495M9 461 aa30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 MFSD14CQ5VZR4 134 aa30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 PAK6Q9NQU5 681 aaPredicted RBP30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 RPTORQ8N122 1335 aa30.86■■■□□ 2.53
GTF3C4-202ENST00000483873 HMGB1P09429 215 aaKnown RBP30.85■■■□□ 2.53
GTF3C4-202ENST00000483873 SGMS1Q86VZ5 419 aa30.85■■■□□ 2.53
GTF3C4-202ENST00000483873 HMX1Q9NP08 348 aaPredicted RBP30.85■■■□□ 2.53
GTF3C4-202ENST00000483873 NFIBO00712 420 aa30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 GJB1P08034 283 aa30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 CCND3P30281 292 aaPredicted RBP30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 BLOC1S2Q6QNY1 142 aa30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 CCDC144CPQ8IYA2 1237 aa30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 FGD4Q96M96 766 aa30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 DIS3Q9Y2L1 958 aaKnown RBP30.84■■■□□ 2.53
GTF3C4-202ENST00000483873 CYTH3O43739 400 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms