RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 SLC15A2Q16348 729 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 SFRP5Q5T4F7 317 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 PRAMEF13Q5VWM6 474 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 TTBK2Q6IQ55 1244 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 LETMD1Q6P1Q0 360 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 HDXQ7Z353 690 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 C1QL4Q86Z23 238 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 ZSCAN29Q8IWY8 852 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-217ENST00000483442 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 PRAM1Q96QH2 718 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 DPH2Q9BQC3 489 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-217ENST00000483442 HIRIP3Q9BW71 556 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-217ENST00000483442 MTFR1LQ9H019 292 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 POGKQ9P215 609 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 NWD2Q9ULI1 1742 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 GPRASP1Q5JY77 1395 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 KIAA0232Q92628 1395 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 ABCC11Q96J66 1382 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 PLCH1Q4KWH8 1693 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 IQGAP3Q86VI3 1631 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 FAM155AB1AL88 458 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TECPR2O15040 1411 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 LDHBP07195 334 aaKnown RBP5.27□□□□□ -1.57
LRCH3-217ENST00000483442 HSPA6P17066 643 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 CFPP27918 469 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 AFMP43652 599 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 ERVFC1P60507 584 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 ETF1P62495 437 aaKnown RBP5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TNK2Q07912 1038 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 PKN1Q16512 942 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TXNRD1Q16881 649 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 CDC42BPGQ6DT37 1551 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 SV2BQ7L1I2 683 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 CDH24Q86UP0 819 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 UBE2FQ969M7 185 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 KIRREL1Q96J84 757 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 SLC38A3Q99624 504 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TNS1Q9HBL0 1735 aaKnown RBP5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 TTF2Q9UNY4 1162 aaKnown RBP5.27□□□□□ -1.57
LRCH3-217ENST00000483442 SPG7Q9UQ90 795 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 SNCAIPQ9Y6H5 919 aa5.27□□□□□ -1.57
LRCH3-217ENST00000483442 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 ZBTB7CA1YPR0 619 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 CST3P01034 146 aaPredicted RBP5.26□□□□□ -1.57
LRCH3-217ENST00000483442 GLI1P08151 1106 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 RALGPS1Q5JS13 557 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 NPAS4Q8IUM7 802 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 HID1Q8IV36 788 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 MFSD2AQ8NA29 543 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 ZNF526Q8TF50 670 aaPredicted RBP5.26□□□□□ -1.57
LRCH3-217ENST00000483442 ZSWIM5Q9P217 1185 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 THRAP3Q9Y2W1 955 aaKnown RBP5.26□□□□□ -1.57
LRCH3-217ENST00000483442 ROCK1Q13464 1354 aa5.26□□□□□ -1.57
LRCH3-217ENST00000483442 NRKQ7Z2Y5 1582 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 RRBP1Q9P2E9 1410 aaKnown RBP5.25□□□□□ -1.57
LRCH3-217ENST00000483442 DNAJC25-GNG10A0A024R161 153 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 ESR1P03372 595 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 C1QTNF9P0C862 333 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 GDNFP39905 211 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 ATP2B2Q01814 1243 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 DDB1Q16531 1140 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 MAP3K11Q16584 847 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 TMEM67Q5HYA8 995 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 LCNL1Q6ZST4 164 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 SYDE1Q6ZW31 735 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-217ENST00000483442 HOMEZQ8IX15 550 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 Q96M66 194 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 C14orf93Q9H972 538 aaKnown RBP5.25□□□□□ -1.57
LRCH3-217ENST00000483442 FAM53CQ9NYF3 392 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 NRXN1Q9ULB1 1477 aa5.25□□□□□ -1.57
LRCH3-217ENST00000483442 THSD7AQ9UPZ6 1657 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 COL14A1Q05707 1796 aaKnown RBP5.24□□□□□ -1.57
LRCH3-217ENST00000483442 CLTCL1P53675 1640 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 NUP188Q5SRE5 1749 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 GRIN3BO60391 1043 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 RAP1GAPP47736 663 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 MPZL3Q6UWV2 235 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 MARCH10Q8NA82 808 aaPredicted RBP5.24□□□□□ -1.57
LRCH3-217ENST00000483442 NLGN2Q8NFZ4 835 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 DIRC2Q96SL1 478 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 SLAMF8Q9P0V8 285 aa5.24□□□□□ -1.57
LRCH3-217ENST00000483442 DHX57Q6P158 1386 aaKnown RBP5.24□□□□□ -1.57
LRCH3-217ENST00000483442 RGPD8O14715 1765 aaPredicted RBP5.24□□□□□ -1.57
LRCH3-217ENST00000483442 PRR36Q9H6K5 1346 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 YTHDC2Q9H6S0 1430 aaKnown RBP5.23□□□□□ -1.57
LRCH3-217ENST00000483442 NRAPQ86VF7 1730 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 CHD4Q14839 1912 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 TSPAN15O95858 294 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 TFE3P19532 575 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-217ENST00000483442 POLD1P28340 1107 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 GNA15P30679 374 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-217ENST00000483442 MEI1Q5TIA1 1274 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 AGMOQ6ZNB7 445 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 TOM1L2Q6ZVM7 507 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
LRCH3-217ENST00000483442 BHLHE22Q8NFJ8 381 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms