RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 STK17AQ9UEE5 414 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 A0A1W2PPC1 479 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 UQCRFS1P1P0C7P4 283 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 RBM25P49756 843 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 SPP2Q13103 211 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 MTX1Q13505 466 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 ZNF598Q86UK7 904 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 TEX11Q8IYF3 940 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 TRMT2AQ8IZ69 625 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 SCG3Q8WXD2 468 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 DEFB118Q96PH6 123 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 TSPAN10Q9H1Z9 355 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 AS3MTQ9HBK9 375 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 RAI14Q9P0K7 980 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 HMG20BQ9P0W2 317 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 SCHIP1Q9P0W5 487 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 LRP2BPQ9P2M1 347 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
CSDE1-207ENST00000483407 HERC5Q9UII4 1024 aaKnown RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-207ENST00000483407 H3BRB1 525 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 BAG3O95817 575 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 HMGCRP04035 888 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 GNAI2P04899 355 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 SLURP2P0DP57 97 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 CAP2P40123 477 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 SMTNP53814 917 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 RARSP54136 660 aaKnown RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 HMGCS2P54868 508 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 MARSP56192 900 aaKnown RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 IRX3P78415 501 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 G3BP1Q13283 466 aaKnown RBP eCLIP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 ZNF211Q13398 564 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 TREML2Q5T2D2 321 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 NECAB2Q7Z6G3 386 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 NSUN4Q96CB9 384 aaKnown RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 DHX36Q9H2U1 1008 aaKnown RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 ANO2Q9NQ90 1003 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 PAK6Q9NQU5 681 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-207ENST00000483407 TMOD4Q9NZQ9 345 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 PI4KBQ9UBF8 816 aa7.19□□□□□ -1.26
CSDE1-207ENST00000483407 COL2A1P02458 1487 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 ZSWIM8A7E2V4 1837 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 RBM47A0AV96 593 aaKnown RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 A6NJY4 79 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 ASNSP08243 561 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 NNTQ13423 1086 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 ZNF697Q5TEC3 545 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 NAA16Q6N069 864 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 PI16Q6UXB8 463 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 CCAR1Q8IX12 1150 aaKnown RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 KDF1Q8NAX2 398 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 ZNF384Q8TF68 577 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 PAWRQ96IZ0 340 aaKnown RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 ASCC2Q9H1I8 757 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-207ENST00000483407 PRO3102Q9H379 93 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 PKD2L1Q9P0L9 805 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 HRH3Q9Y5N1 445 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 RPTORQ8N122 1335 aa7.18□□□□□ -1.26
CSDE1-207ENST00000483407 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 C19orf81C9J6K1 198 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 IGSF3O75054 1194 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 IL2RAP01589 272 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 NPR3P17342 541 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 MCAMP43121 646 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 BACE1P56817 501 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 OS9Q13438 667 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 PDE3AQ14432 1141 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 TTC39AQ5SRH9 613 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 ATF7IPQ6VMQ6 1270 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 Q6ZVU0 165 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 FOXP4Q8IVH2 680 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 CRACR2BQ8N4Y2 399 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 HELQQ8TDG4 1101 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 SOCS4Q8WXH5 440 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 FRAT1Q92837 279 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 ESYT1Q9BSJ8 1104 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 WDR18Q9BV38 432 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 C2orf49Q9BVC5 232 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 KLF16Q9BXK1 252 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 ARHGEF10LQ9HCE6 1279 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 GINM1Q9NU53 330 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 AATFQ9NY61 560 aaKnown RBP eCLIP7.17□□□□□ -1.26
CSDE1-207ENST00000483407 MORF4L1Q9UBU8 362 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 STAP2Q9UGK3 403 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 AK9Q5TCS8 1911 aa7.17□□□□□ -1.26
CSDE1-207ENST00000483407 COL6A3P12111 3177 aa7.16□□□□□ -1.26
CSDE1-207ENST00000483407 PNMA6EA0A0J9YXQ4 647 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms