RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SH2B2O14492 632 aaPredicted RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 HMGCRP04035 888 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 INHAP05111 366 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 XRCC5P13010 732 aaKnown RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 ADORA2AP29274 412 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 COL9A3Q14050 684 aaPredicted RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 KCTD2Q14681 263 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 ADCK5Q3MIX3 580 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 DPP9Q86TI2 863 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 TRMT44Q8IYL2 757 aaKnown RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 ABRAQ8N0Z2 381 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 TMTC2Q8N394 836 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 KCNB2Q92953 911 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 UBA5Q9GZZ9 404 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 LY9Q9HBG7 655 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
SNX4-205ENST00000482965 HOMER2Q9NSB8 354 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 SLC5A4Q9NY91 659 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 FBXO40Q9UH90 709 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 RIPK3Q9Y572 518 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 SNX14Q9Y5W7 946 aa10.24□□□□□ -0.77
SNX4-205ENST00000482965 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
SNX4-205ENST00000482965 HMGB1P09429 215 aaKnown RBP10.23□□□□□ -0.77
SNX4-205ENST00000482965 HOXC6P09630 235 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 ALAS1P13196 640 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 SOX10P56693 466 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 GRM4Q14833 912 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 CCL14Q16627 93 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 TKFCQ3LXA3 575 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 DHX32Q7L7V1 743 aaKnown RBP10.23□□□□□ -0.77
SNX4-205ENST00000482965 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 STAG2Q8N3U4 1231 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 CHST13Q8NET6 341 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 NPLOC4Q8TAT6 608 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 TRIB2Q92519 343 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 TCEANC2Q96MN5 208 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
SNX4-205ENST00000482965 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 USP26Q9BXU7 913 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 CPVLQ9H3G5 476 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 ZNF536O15090 1300 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
SNX4-205ENST00000482965 RBBP6Q7Z6E9 1792 aaKnown RBP10.23□□□□□ -0.77
SNX4-205ENST00000482965 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 COBLO75128 1261 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 DDAH1O94760 285 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 ICAM1P05362 532 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 CCL5P13501 91 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 PSMA5P28066 241 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 LIFRP42702 1097 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 FGD1P98174 961 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 TROAPQ12815 778 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 MTFR1Q15390 333 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 CDC37Q16543 378 aaPredicted RBP10.22□□□□□ -0.77
SNX4-205ENST00000482965 MFSD14CQ5VZR4 134 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 BLOC1S2Q6QNY1 142 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 ADGRF4Q8IZF3 695 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 ANKRD35Q8N283 1001 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
SNX4-205ENST00000482965 DDX11Q96FC9 970 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 MYL10Q9BUA6 226 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 VAT1LQ9HCJ6 419 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 MAD2L2Q9UI95 211 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 PNMA2Q9UL42 364 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 MCM3APO60318 1980 aa10.22□□□□□ -0.77
SNX4-205ENST00000482965 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
SNX4-205ENST00000482965 PGK2P07205 417 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 CALM1P0DP23 149 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 CALM2P0DP24 149 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 CALM3P0DP25 149 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 CPA1P15085 419 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 TAL1P17542 331 aaPredicted RBP10.21□□□□□ -0.77
SNX4-205ENST00000482965 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.77
SNX4-205ENST00000482965 KIF5BP33176 963 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 EXOSC10Q01780 885 aaKnown RBP10.21□□□□□ -0.77
SNX4-205ENST00000482965 TRIM32Q13049 653 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNX4-205ENST00000482965 MAP3K14Q99558 947 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 RNF208Q9H0X6 261 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 FLRT1Q9NZU1 646 aa10.21□□□□□ -0.77
SNX4-205ENST00000482965 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
SNX4-205ENST00000482965 RXRAP19793 462 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 RPS6KB1P23443 525 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 GNAQP50148 359 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 QRICH1Q2TAL8 776 aa10.2□□□□□ -0.78
SNX4-205ENST00000482965 ZNF792Q3KQV3 632 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms