RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 FRMPD2Q68DX3 1309 aaPredicted RBP23.53■■□□□ 1.36
CLIP2-205ENST00000482424 E7EWF7 191 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 MSCO60682 206 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 SLC4A3P48751 1232 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 TRDNQ13061 729 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 SEC23AQ15436 765 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 GPATCH4Q5T3I0 446 aaKnown RBP23.52■■□□□ 1.36
CLIP2-205ENST00000482424 CYB5R4Q7L1T6 521 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 MSL3Q8N5Y2 521 aaKnown RBP23.52■■□□□ 1.36
CLIP2-205ENST00000482424 DDX11Q96FC9 970 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 TINF2Q9BSI4 451 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 KAT14Q9H8E8 782 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 GPCPD1Q9NPB8 672 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 DDX20Q9UHI6 824 aaKnown RBP23.52■■□□□ 1.36
CLIP2-205ENST00000482424 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.36
CLIP2-205ENST00000482424 ICAM1P05362 532 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 SNAP25P60880 206 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 KIAA1211Q6ZU35 1233 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 PAWRQ96IZ0 340 aaKnown RBP23.51■■□□□ 1.35
CLIP2-205ENST00000482424 UBAC1Q9BSL1 405 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 NRBP1Q9UHY1 535 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 FRMPD3Q5JV73 1810 aa23.51■■□□□ 1.35
CLIP2-205ENST00000482424 CCDC174Q6PII3 467 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 MAMDC4Q6UXC1 1216 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 STOX1Q6ZVD7 989 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 ZNF467Q7Z7K2 595 aaPredicted RBP23.5■■□□□ 1.35
CLIP2-205ENST00000482424 ANKRD35Q8N283 1001 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 TRERF1Q96PN7 1200 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 HTATIP2Q9BUP3 242 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 RNF146Q9NTX7 359 aa23.5■■□□□ 1.35
CLIP2-205ENST00000482424 SMCHD1A6NHR9 2005 aa23.49■■□□□ 1.35
CLIP2-205ENST00000482424 PRAMEF19Q5SWL8 479 aa23.49■■□□□ 1.35
CLIP2-205ENST00000482424 NECAB2Q7Z6G3 386 aa23.49■■□□□ 1.35
CLIP2-205ENST00000482424 NCOA7Q8NI08 942 aa23.49■■□□□ 1.35
CLIP2-205ENST00000482424 DIS3LQ8TF46 1054 aaKnown RBP23.49■■□□□ 1.35
CLIP2-205ENST00000482424 HOMER2Q9NSB8 354 aa23.49■■□□□ 1.35
CLIP2-205ENST00000482424 SEPT4O43236 478 aa23.48■■□□□ 1.35
CLIP2-205ENST00000482424 ALAS1P13196 640 aa23.48■■□□□ 1.35
CLIP2-205ENST00000482424 CNGA1P29973 690 aa23.48■■□□□ 1.35
CLIP2-205ENST00000482424 IFIT1BQ5T764 474 aaKnown RBP23.48■■□□□ 1.35
CLIP2-205ENST00000482424 FGD4Q96M96 766 aa23.48■■□□□ 1.35
CLIP2-205ENST00000482424 A1CFQ9NQ94 594 aaKnown RBP23.48■■□□□ 1.35
CLIP2-205ENST00000482424 CCPG1Q9ULG6 757 aa23.48■■□□□ 1.35
CLIP2-205ENST00000482424 GOLGA8HP0CJ92 632 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 NECTIN1Q15223 517 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 ASPRV1Q53RT3 343 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 MUM1L1Q5H9M0 696 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 ERICH6BQ5W0A0 696 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 RALYLQ86SE5 291 aaKnown RBP23.47■■□□□ 1.35
CLIP2-205ENST00000482424 FAM133AQ8N9E0 248 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 PNMA2Q9UL42 364 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 SYNGAP1Q96PV0 1343 aa23.47■■□□□ 1.35
CLIP2-205ENST00000482424 PFASO15067 1338 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 WDR19Q8NEZ3 1342 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 CDC45O75419 566 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 SNAI1O95863 264 aaPredicted RBP23.45■■□□□ 1.34
CLIP2-205ENST00000482424 ZNF865P0CJ78 1059 aaPredicted RBP23.45■■□□□ 1.34
CLIP2-205ENST00000482424 COL6A1P12109 1028 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 MB21D2Q8IYB1 491 aaPredicted RBP23.45■■□□□ 1.34
CLIP2-205ENST00000482424 UBA5Q9GZZ9 404 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 C11orf49Q9H6J7 331 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 ANO2Q9NQ90 1003 aa23.45■■□□□ 1.34
CLIP2-205ENST00000482424 POTEB2H3BUK9 544 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 IFIT3O14879 490 aaKnown RBP23.44■■□□□ 1.34
CLIP2-205ENST00000482424 SLC27A2O14975 620 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 TAL1P17542 331 aaPredicted RBP23.44■■□□□ 1.34
CLIP2-205ENST00000482424 ANTXR2P58335 489 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 CNTN2Q02246 1040 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 DPF3Q92784 378 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 MTA3Q9BTC8 594 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 CYP39A1Q9NYL5 469 aa23.44■■□□□ 1.34
CLIP2-205ENST00000482424 PARP1P09874 1014 aaKnown RBP23.43■■□□□ 1.34
CLIP2-205ENST00000482424 CREB3L3Q68CJ9 461 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 CASC1Q6TDU7 716 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 ADGRF4Q8IZF3 695 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 IGDCC4Q8TDY8 1250 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 CPVLQ9H3G5 476 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 CNPY2Q9Y2B0 182 aa23.43■■□□□ 1.34
CLIP2-205ENST00000482424 ALPK3Q96L96 1907 aa23.42■■□□□ 1.34
CLIP2-205ENST00000482424 ERICH2A1L162 156 aa23.42■■□□□ 1.34
CLIP2-205ENST00000482424 SOWAHBA6NEL2 793 aa23.42■■□□□ 1.34
CLIP2-205ENST00000482424 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
CLIP2-205ENST00000482424 SART3Q15020 963 aaKnown RBP23.42■■□□□ 1.34
CLIP2-205ENST00000482424 CLEC4DQ8WXI8 215 aa23.42■■□□□ 1.34
CLIP2-205ENST00000482424 PPP4R2Q9NY27 417 aa23.42■■□□□ 1.34
CLIP2-205ENST00000482424 PALM3A6NDB9 673 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-205ENST00000482424 DNM1LO00429 736 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 WTAPQ15007 396 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 CHST3Q7LGC8 479 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 STAG2Q8N3U4 1231 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 ARRDC4Q8NCT1 418 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 SENP2Q9HC62 589 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.41■■□□□ 1.34
CLIP2-205ENST00000482424 MAD2L2Q9UI95 211 aa23.41■■□□□ 1.34
CLIP2-205ENST00000482424 ASTN1O14525 1302 aa23.4■■□□□ 1.34
CLIP2-205ENST00000482424 MCM3APO60318 1980 aa23.4■■□□□ 1.34
CLIP2-205ENST00000482424 LCTP09848 1927 aa23.4■■□□□ 1.34
CLIP2-205ENST00000482424 NFIBO00712 420 aa23.4■■□□□ 1.34
CLIP2-205ENST00000482424 AKR1A1P14550 325 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms