RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 ZMYND12Q9H0C1 365 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 RANBP17Q9H2T7 1088 aaKnown RBP10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 RPAP3Q9H6T3 665 aaPredicted RBP10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 BRMS1Q9HCU9 246 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 FEM1BQ9UK73 627 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 PCDHA4Q9UN74 947 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
ERGIC3-214ENST00000482338 WDR81Q562E7 1941 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 PLXNA1Q9UIW2 1896 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 SMCO2A6NFE2 343 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 SPDYE5A6NIY4 337 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 C19orf81C9J6K1 198 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 TOB1P50616 345 aaPredicted RBP10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 CEBPZQ03701 1054 aaKnown RBP10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 LDLRAD1Q5T700 205 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 ATL3Q6DD88 541 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 GALNT17Q6IS24 598 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 FBXO11Q86XK2 927 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 ERO1BQ86YB8 467 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 KIFC2Q96AC6 838 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 TANGO6Q9C0B7 1094 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 CLIC4Q9Y696 253 aa10.11□□□□□ -0.79
ERGIC3-214ENST00000482338 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 ELP1O95163 1332 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 IRF6O14896 467 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 GADD45BO75293 160 aaPredicted RBP10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 PTMSP20962 102 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 PPATQ06203 517 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 USH1GQ495M9 461 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 LEO1Q8WVC0 666 aaPredicted RBP10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 OPTNQ96CV9 577 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 SCAND2PQ9GZW5 306 aaPredicted RBP10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 GBA2Q9HCG7 927 aaPredicted RBP10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 C6orf50Q9HD87 102 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 CFAP45Q9UL16 551 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 PCDHA6Q9UN73 950 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 PCDHA8Q9Y5H6 950 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 DOCK5Q9H7D0 1870 aa10.1□□□□□ -0.79
ERGIC3-214ENST00000482338 A0A0G2JLL6 359 aaPredicted RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 WNT7AO00755 349 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 FLOT1O75955 427 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 ITGBL1O95965 494 aaPredicted RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 GNA11P29992 359 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 GJA5P36382 358 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 NASPP49321 788 aaPredicted RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 ADCY7P51828 1080 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PPIL2Q13356 520 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 ANO1Q5XXA6 986 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PIK3AP1Q6ZUJ8 805 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PRRT2Q7Z6L0 340 aaPredicted RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 WNK4Q96J92 1243 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 RIC8AQ9NPQ8 531 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 TMEM260Q9NX78 707 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 RTEL1Q9NZ71 1219 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 RCOR1Q9UKL0 485 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PPP1R9AQ9ULJ8 1098 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 KCNH4Q9UQ05 1017 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
ERGIC3-214ENST00000482338 ZNF536O15090 1300 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 OPLAHO14841 1288 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 YEATS4O95619 227 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 FKBP1BP68106 108 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 PTPAQ15257 358 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 UBE2SQ16763 222 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 RILPL1Q5EBL4 403 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 TREML2Q5T2D2 321 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 JAKMIP3Q5VZ66 844 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 GADL1Q6ZQY3 521 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 CATSPERGQ6ZRH7 1159 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 REXO1Q8N1G1 1221 aaKnown RBP10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 BICD2Q8TD16 824 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 GPT2Q8TD30 523 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 CUL5Q93034 780 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 ATG4CQ96DT6 458 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 PGBD1Q96JS3 809 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 SLC38A10Q9HBR0 1119 aa10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 NOL7Q9UMY1 257 aaKnown RBP10.08□□□□□ -0.8
ERGIC3-214ENST00000482338 PCDHB6Q9Y5E3 794 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms