RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 TRIM29Q14134 588 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
COL4A2-206ENST00000480609 CDC37Q16543 378 aaPredicted RBP15.18■□□□□ 0.02
COL4A2-206ENST00000480609 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 GPAT2Q6NUI2 795 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 REPS2Q8NFH8 660 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 AIFM3Q96NN9 605 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 CPVLQ9H3G5 476 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 H3BQV1 296 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 M0R2N6 131 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
COL4A2-206ENST00000480609 ICAM1P05362 532 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 GNA11P29992 359 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 INHBEP58166 350 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 KIF23Q02241 960 aaPredicted RBP15.17■□□□□ 0.02
COL4A2-206ENST00000480609 RESTQ13127 1097 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 PKP1Q13835 747 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 MCTP2Q6DN12 878 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL4A2-206ENST00000480609 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 MAP3K20Q9NYL2 800 aaKnown RBP15.17■□□□□ 0.02
COL4A2-206ENST00000480609 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 ZNF536O15090 1300 aa15.17■□□□□ 0.02
COL4A2-206ENST00000480609 MANSC4A6NHS7 340 aaPredicted RBP15.16■□□□□ 0.02
COL4A2-206ENST00000480609 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
COL4A2-206ENST00000480609 VWA5AO00534 786 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 RAD21O60216 631 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 FLOT1O75955 427 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL4A2-206ENST00000480609 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 FBXO28Q9NVF7 368 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 VPS54Q9P1Q0 977 aa15.16■□□□□ 0.02
COL4A2-206ENST00000480609 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
COL4A2-206ENST00000480609 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 ZBED4O75132 1171 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 IKQ13123 557 aaPredicted RBP15.15■□□□□ 0.02
COL4A2-206ENST00000480609 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 PCDHA4Q9UN74 947 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 ABCB11O95342 1321 aa15.15■□□□□ 0.02
COL4A2-206ENST00000480609 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 RASSF10A6NK89 507 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 PPFIA3O75145 1194 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 DGKZQ13574 1117 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 HEATR3Q7Z4Q2 680 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 BRI3BPQ8WY22 251 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 KIFC2Q96AC6 838 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
COL4A2-206ENST00000480609 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
COL4A2-206ENST00000480609 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 hCG_1642624A0A1W2PR95 340 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 OSBPP22059 807 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 COPB2P35606 906 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 KRT2P35908 639 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 TRAPPC10P48553 1259 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 APLP1P51693 650 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 ZNF157P51786 506 aaPredicted RBP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 NAPAP54920 295 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 NLRP5P59047 1200 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 CCL15Q16663 113 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 OTUD7BQ6GQQ9 843 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 NOSTRINQ8IVI9 506 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 BLIDQ8IZY5 108 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 GPKOWQ92917 476 aaPredicted RBP eCLIP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 TNPO1Q92973 898 aaKnown RBP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 ASCC2Q9H1I8 757 aaPredicted RBP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 GJB4Q9NTQ9 266 aa15.13■□□□□ 0.01
COL4A2-206ENST00000480609 MRPL11Q9Y3B7 192 aaKnown RBP15.13■□□□□ 0.01
COL4A2-206ENST00000480609 SMCO2A6NFE2 343 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 BTBD19C9JJ37 291 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 DTNBO60941 627 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
COL4A2-206ENST00000480609 AP3B2Q13367 1082 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 CUL5Q93034 780 aa15.12■□□□□ 0.01
COL4A2-206ENST00000480609 COA7Q96BR5 231 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms