RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 HOMER2Q9NSB8 354 aa14.1□□□□□ -0.15
CCM2-212ENST00000480382 BIN2Q9UBW5 565 aaPredicted RBP14.1□□□□□ -0.15
CCM2-212ENST00000480382 STRNO43815 780 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 FCER1AP12319 257 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 CPA1P15085 419 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 SOX10P56693 466 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 TROAPQ12815 778 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 GRM4Q14833 912 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 CCL14Q16627 93 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 DHX32Q7L7V1 743 aaKnown RBP14.09□□□□□ -0.15
CCM2-212ENST00000480382 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 NPLOC4Q8TAT6 608 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 CCPG1Q9ULG6 757 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 WDR19Q8NEZ3 1342 aa14.09□□□□□ -0.15
CCM2-212ENST00000480382 FRMPD3Q5JV73 1810 aa14.08□□□□□ -0.15
CCM2-212ENST00000480382 CCDC69A6NI79 296 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 COBLO75128 1261 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 HMGCRP04035 888 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 ICAM1P05362 532 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 XRCC5P13010 732 aaKnown RBP14.08□□□□□ -0.16
CCM2-212ENST00000480382 ALAS1P13196 640 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 LIFRP42702 1097 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 UBXN2AP68543 259 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 EXOSC10Q01780 885 aaKnown RBP14.08□□□□□ -0.16
CCM2-212ENST00000480382 TRIM32Q13049 653 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 KCTD2Q14681 263 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 MTFR1Q15390 333 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 CDC37Q16543 378 aaPredicted RBP14.08□□□□□ -0.16
CCM2-212ENST00000480382 IFFO2Q5TF58 517 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 DPP9Q86TI2 863 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 ADGRF4Q8IZF3 695 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 ABRAQ8N0Z2 381 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 RNF146Q9NTX7 359 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 FLRT1Q9NZU1 646 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
CCM2-212ENST00000480382 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
CCM2-212ENST00000480382 KLRF2D3W0D1 207 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
CCM2-212ENST00000480382 DDAH1O94760 285 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 PGK2P07205 417 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 HMGB1P09429 215 aaKnown RBP14.07□□□□□ -0.16
CCM2-212ENST00000480382 HOXC6P09630 235 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 RXRAP19793 462 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 BLOC1S2Q6QNY1 142 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 CHST13Q8NET6 341 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 FBXO40Q9UH90 709 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
CCM2-212ENST00000480382 BAZ2BQ9UIF8 2168 aaKnown RBP14.06□□□□□ -0.16
CCM2-212ENST00000480382 SEC24BO95487 1268 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 CCL5P13501 91 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
CCM2-212ENST00000480382 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 MUM1L1Q5H9M0 696 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCM2-212ENST00000480382 SGMS1Q86VZ5 419 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 TRMT44Q8IYL2 757 aaKnown RBP14.06□□□□□ -0.16
CCM2-212ENST00000480382 ANKRD35Q8N283 1001 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 UNC93B1Q9H1C4 597 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 JMJD4Q9H9V9 463 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 VAT1LQ9HCJ6 419 aa14.06□□□□□ -0.16
CCM2-212ENST00000480382 MCM3APO60318 1980 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
CCM2-212ENST00000480382 RPS6KB1P23443 525 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 PSMA5P28066 241 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 QRICH1Q2TAL8 776 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 USH1GQ495M9 461 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 Q6ZUG5 572 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 CTCFLQ8NI51 663 aaPredicted RBP14.05□□□□□ -0.16
CCM2-212ENST00000480382 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 MAML3Q96JK9 1138 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 A1CFQ9NQ94 594 aaKnown RBP14.05□□□□□ -0.16
CCM2-212ENST00000480382 SLC5A4Q9NY91 659 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
CCM2-212ENST00000480382 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 NFIBO00712 420 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 CYTH3O43739 400 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 PLEKHA8P1O95397 391 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 CALM1P0DP23 149 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 CALM2P0DP24 149 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 CALM3P0DP25 149 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 FGD1P98174 961 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 CACNB2Q08289 660 aaPredicted RBP14.04□□□□□ -0.16
CCM2-212ENST00000480382 ZNF792Q3KQV3 632 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 MAP3K21Q5TCX8 1036 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 APOA5Q6Q788 366 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 HOMER1Q86YM7 354 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
CCM2-212ENST00000480382 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms