RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SGMS1Q86VZ5 419 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 ZNF444Q8N0Y2 327 aaPredicted RBP10.46□□□□□ -0.73
DDX56-211ENST00000479602 SPICE1Q8N0Z3 855 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 TMTC2Q8N394 836 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 ARRDC4Q8NCT1 418 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
DDX56-211ENST00000479602 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
DDX56-211ENST00000479602 PARP14Q460N5 1801 aa10.46□□□□□ -0.74
DDX56-211ENST00000479602 ATP2A1O14983 1001 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 FLOT1O75955 427 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 ZNF865P0CJ78 1059 aaPredicted RBP10.45□□□□□ -0.74
DDX56-211ENST00000479602 TSPY3P0CV98 308 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 TSPY8P0CW00 308 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 MCM5P33992 734 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 LRRC41Q15345 812 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 SEC23AQ15436 765 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 GJC2Q5T442 439 aaPredicted RBP10.45□□□□□ -0.74
DDX56-211ENST00000479602 CCSAPQ6IQ19 270 aaPredicted RBP10.45□□□□□ -0.74
DDX56-211ENST00000479602 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 Q7L0L9 218 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
DDX56-211ENST00000479602 DEFB123Q8N688 67 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 FBXO28Q9NVF7 368 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 PPP1R9AQ9ULJ8 1098 aa10.45□□□□□ -0.74
DDX56-211ENST00000479602 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 DNAJC25-GNG10A0A024R161 153 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 TSPY2A6NKD2 308 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 FCER1AP12319 257 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 STAT3P40763 770 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
DDX56-211ENST00000479602 EXOSC10Q01780 885 aaKnown RBP10.44□□□□□ -0.74
DDX56-211ENST00000479602 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 SART3Q15020 963 aaKnown RBP10.44□□□□□ -0.74
DDX56-211ENST00000479602 PPP2R5BQ15173 497 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 WDR78Q5VTH9 848 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 MAMDC4Q6UXC1 1216 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
DDX56-211ENST00000479602 TEX2Q8IWB9 1127 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 SLC17A8Q8NDX2 589 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 NEK1Q96PY6 1258 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 TANGO6Q9C0B7 1094 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 MAF1Q9H063 256 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 IL17RBQ9NRM6 502 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 SLC5A4Q9NY91 659 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 ZSWIM5Q9P217 1185 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 SNX14Q9Y5W7 946 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 SMCHD1A6NHR9 2005 aa10.44□□□□□ -0.74
DDX56-211ENST00000479602 EYSQ5T1H1 3165 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 MUC3AQ02505 3323 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TRIM43BA6NCK2 446 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 F5H6K3 240 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 SNAI1O95863 264 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 FDX1P10109 184 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TOP1P11387 765 aaKnown RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 TAL1P17542 331 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 ITGB8P26012 769 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 CNGA1P29973 690 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 RTP1P59025 263 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 HAND2P61296 217 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 NKX3-2P78367 333 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TFAP4Q01664 338 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 KLRC3Q07444 240 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 NCAPG2Q86XI2 1143 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 MSL3Q8N5Y2 521 aaKnown RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 KLHDC9Q8NEP7 349 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TRIM43Q96BQ3 446 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 CEP95Q96GE4 821 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TBC1D32Q96NH3 1257 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 GUCD1Q96NT3 240 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 UPF2Q9HAU5 1272 aaKnown RBP10.43□□□□□ -0.74
DDX56-211ENST00000479602 RIPK3Q9Y572 518 aa10.43□□□□□ -0.74
DDX56-211ENST00000479602 TNKSO95271 1327 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 B4E1Z4 1266 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 RANBP6O60518 1105 aaKnown RBP10.42□□□□□ -0.74
DDX56-211ENST00000479602 KDM4AO75164 1064 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 ADAMTS4O75173 837 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 DDAH1O94760 285 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 PGK2P07205 417 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 ADCYAP1R1P41586 468 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 ANTXR2P58335 489 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 FAM47AQ5JRC9 791 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 SH3RF1Q7Z6J0 888 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 IGDCC4Q8TDY8 1250 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 FGD4Q96M96 766 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
DDX56-211ENST00000479602 GOPCQ9HD26 462 aa10.42□□□□□ -0.74
DDX56-211ENST00000479602 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms