RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 LAMA2P24043 3122 aaKnown RBP20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 SDSP20132 328 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 BMP8BP34820 402 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 NUCB1Q02818 461 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 Q7L0L9 218 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 STAG1Q8WVM7 1258 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 PURBQ96QR8 312 aaKnown RBP20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 RNF146Q9NTX7 359 aa20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 DIS3Q9Y2L1 958 aaKnown RBP20.57■□□□□ 0.88
ECHDC1-216ENST00000479525 NEDD4P46934 1319 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 ALX1Q15699 326 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 CWC27Q6UX04 472 aaKnown RBP20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 TDHQ8IZJ6 230 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 GMCL1Q96IK5 515 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 GPCPD1Q9NPB8 672 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 CNPY2Q9Y2B0 182 aa20.56■□□□□ 0.88
ECHDC1-216ENST00000479525 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
ECHDC1-216ENST00000479525 ORC4O43929 436 aa20.55■□□□□ 0.88
ECHDC1-216ENST00000479525 AKR1A1P14550 325 aa20.55■□□□□ 0.88
ECHDC1-216ENST00000479525 A0A1W2PPC1 479 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 RCSD1Q6JBY9 416 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 ARMCX2Q7L311 632 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 FAM160B2Q86V87 743 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 CHURC1Q8WUH1 139 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 A1CFQ9NQ94 594 aaKnown RBP20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 MYH6P13533 1939 aa20.54■□□□□ 0.88
ECHDC1-216ENST00000479525 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 A0A1W2PQ45 241 aaPredicted RBP20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 A0A1W2PQY0 241 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 ADAMTS4O75173 837 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 PDE4AP27815 886 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 CHST13Q8NET6 341 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 IL25Q9H293 177 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 ACAD9Q9H845 621 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 SYNPO2Q9UMS6 1093 aa20.53■□□□□ 0.88
ECHDC1-216ENST00000479525 ASTN1O14525 1302 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 SYNGAP1Q96PV0 1343 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 SOWAHBA6NEL2 793 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 FGRP09769 529 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 ACVR2BQ13705 512 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 LBHD1Q9BQE6 289 aaPredicted RBP20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 CPVLQ9H3G5 476 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 PDLIM7Q9NR12 457 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 PRKAG2Q9UGJ0 569 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 PHF24Q9UPV7 400 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 COL6A3P12111 3177 aa20.52■□□□□ 0.88
ECHDC1-216ENST00000479525 TRIM43BA6NCK2 446 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 PQBP1O60828 265 aaKnown RBP20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 ITGB8P26012 769 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 OAZ1P54368 228 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 TLE2Q04725 743 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 CCDC144BQ3MJ40 725 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 TMEM63BQ5T3F8 832 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 NSMFQ6X4W1 530 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 EEPD1Q7L9B9 569 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 RNF180Q86T96 592 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 BADQ92934 168 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 TRIM43Q96BQ3 446 aaPredicted RBP20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 DIAPH3Q9NSV4 1193 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 FBXO40Q9UH90 709 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
ECHDC1-216ENST00000479525 C6orf222P0C671 652 aaPredicted RBP20.5■□□□□ 0.87
ECHDC1-216ENST00000479525 KCNA10Q16322 511 aa20.5■□□□□ 0.87
ECHDC1-216ENST00000479525 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
ECHDC1-216ENST00000479525 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 NOVP48745 357 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 BEX3Q00994 111 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 SNX17Q15036 470 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 C9orf50Q5SZB4 431 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 SYDE2Q5VT97 1194 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 FAM133AQ8N9E0 248 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 DCAF4Q8WV16 495 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 KATNBL1Q9H079 304 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 OSBPL3Q9H4L5 887 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 ZMYM6O95789 1325 aa20.49■□□□□ 0.87
ECHDC1-216ENST00000479525 B4E1Z4 1266 aa20.48■□□□□ 0.87
ECHDC1-216ENST00000479525 PDHBP11177 359 aa20.48■□□□□ 0.87
ECHDC1-216ENST00000479525 AAMPQ13685 434 aa20.48■□□□□ 0.87
ECHDC1-216ENST00000479525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.48■□□□□ 0.87
ECHDC1-216ENST00000479525 PDGFCQ9NRA1 345 aa20.48■□□□□ 0.87
ECHDC1-216ENST00000479525 NFIBO00712 420 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 GSPT1P15170 499 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 ACLYP53396 1101 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
ECHDC1-216ENST00000479525 NOL8Q76FK4 1167 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms