RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 MICU3Q86XE3 530 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 BRF1Q92994 677 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 NUDT12Q9BQG2 462 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 LZTS2Q9BRK4 669 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 MCOLN1Q9GZU1 580 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 CPVLQ9H3G5 476 aa29.11■■■□□ 2.25
PERM1-203ENST00000479361 ICAM1P05362 532 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 SLC4A3P48751 1232 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 FLT3LGP49771 235 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 RCAN1P53805 252 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 RAET1EQ8TD07 263 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 C22orf23Q9BZE7 217 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 PDRG1Q9NUG6 133 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 BRPF3Q9ULD4 1205 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 ZNF536O15090 1300 aa29.1■■■□□ 2.25
PERM1-203ENST00000479361 SLC15A5A6NIM6 579 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 PTPREP23469 700 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 TKFCQ3LXA3 575 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 ABRAQ8N0Z2 381 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 CHST13Q8NET6 341 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 AGBL1Q96MI9 1066 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 FBXO40Q9UH90 709 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 GJD2Q9UKL4 321 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 CCPG1Q9ULG6 757 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 NAP1L2Q9ULW6 460 aaPredicted RBP29.09■■■□□ 2.25
PERM1-203ENST00000479361 GABRQQ9UN88 632 aa29.09■■■□□ 2.25
PERM1-203ENST00000479361 FCER1AP12319 257 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 RXRAP19793 462 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 APOBRQ0VD83 1088 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 IRF5Q13568 498 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 JMJD4Q9H9V9 463 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 VAT1LQ9HCJ6 419 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 RBM28Q9NW13 759 aaKnown RBP29.08■■■□□ 2.25
PERM1-203ENST00000479361 RIPK3Q9Y572 518 aa29.08■■■□□ 2.25
PERM1-203ENST00000479361 SMARCA1P28370 1054 aa29.07■■■□□ 2.24
PERM1-203ENST00000479361 GRB14Q14449 540 aa29.07■■■□□ 2.24
PERM1-203ENST00000479361 CDC37Q16543 378 aaPredicted RBP29.07■■■□□ 2.24
PERM1-203ENST00000479361 MORN1Q5T089 497 aa29.07■■■□□ 2.24
PERM1-203ENST00000479361 CCDC144CPQ8IYA2 1237 aa29.07■■■□□ 2.24
PERM1-203ENST00000479361 PTCH2Q9Y6C5 1203 aa29.07■■■□□ 2.24
PERM1-203ENST00000479361 ALAS1P13196 640 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 RGS2P41220 211 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 RBM25P49756 843 aaKnown RBP29.06■■■□□ 2.24
PERM1-203ENST00000479361 KCTD2Q14681 263 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 PPP2R5BQ15173 497 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 RAB11FIP4Q86YS3 637 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 MMP19Q99542 508 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 SPZ1Q9BXG8 430 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 RIOX1Q9H6W3 641 aa29.06■■■□□ 2.24
PERM1-203ENST00000479361 GOLGA8AA7E2F4 631 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 GOLGA8BA8MQT2 603 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 MAP2K5Q13163 448 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 RTN1Q16799 776 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 TNS4Q8IZW8 715 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 ACAD9Q9H845 621 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 HOMER2Q9NSB8 354 aa29.05■■■□□ 2.24
PERM1-203ENST00000479361 CCDC196A0A1B0GTZ2 297 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 XRCC5P13010 732 aaKnown RBP29.04■■■□□ 2.24
PERM1-203ENST00000479361 ADORA2AP29274 412 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 EVCP57679 992 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 TOB2Q14106 344 aaPredicted RBP29.04■■■□□ 2.24
PERM1-203ENST00000479361 ANKRD1Q15327 319 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 USP6NLQ92738 828 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 MTMR8Q96EF0 704 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 TRERF1Q96PN7 1200 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 BACH2Q9BYV9 841 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 ALDH8A1Q9H2A2 487 aaPredicted RBP29.04■■■□□ 2.24
PERM1-203ENST00000479361 RNF146Q9NTX7 359 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 SLC5A4Q9NY91 659 aa29.04■■■□□ 2.24
PERM1-203ENST00000479361 ZBTB5O15062 677 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 METAP2P50579 478 aaKnown RBP eCLIP29.03■■■□□ 2.24
PERM1-203ENST00000479361 TRAF1Q13077 416 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 QRICH1Q2TAL8 776 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 TMTC3Q6ZXV5 915 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.03■■■□□ 2.24
PERM1-203ENST00000479361 NBPF11Q86T75 865 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 DPP9Q86TI2 863 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 SLAIN1Q8ND83 568 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 APBA2Q99767 749 aa29.03■■■□□ 2.24
PERM1-203ENST00000479361 CYTH3O43739 400 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 ADCY3O60266 1144 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 PLEKHA8P1O95397 391 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 CYP2B6P20813 491 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 SLC9C1Q4G0N8 1177 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 FBXO11Q86XK2 927 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 TRMT44Q8IYL2 757 aaKnown RBP29.02■■■□□ 2.24
PERM1-203ENST00000479361 PXYLP1Q8TE99 480 aa29.02■■■□□ 2.24
PERM1-203ENST00000479361 NEK4P51957 841 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 HOMER1Q86YM7 354 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 ANKRD35Q8N283 1001 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 SRBD1Q8N5C6 995 aaKnown RBP29.01■■■□□ 2.23
PERM1-203ENST00000479361 RRP36Q96EU6 259 aaKnown RBP29.01■■■□□ 2.23
PERM1-203ENST00000479361 DDX11Q96FC9 970 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 AMNQ9BXJ7 453 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 HPS5Q9UPZ3 1129 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 DOCK3Q8IZD9 2030 aa29.01■■■□□ 2.23
PERM1-203ENST00000479361 PLXNB2O15031 1838 aa29■■■□□ 2.23
PERM1-203ENST00000479361 ZNF236Q9UL36 1845 aa29■■■□□ 2.23
PERM1-203ENST00000479361 PNMA6FA0A0J9YX94 578 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms