RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 CEP290O15078 2479 aa9.28□□□□□ -0.92
DDX39B-218ENST00000478365 LOC102724159A0A0B4J2E5 919 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 IFIT3O14879 490 aaKnown RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 SLC27A2O14975 620 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ICAM1P05362 532 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 PARP1P09874 1014 aaKnown RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ELNP15502 786 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 GJA8P48165 433 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 WTAPQ15007 396 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 PWP2Q15269 919 aaKnown RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 TSGA10IPQ3SY00 556 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 MAP3K21Q5TCX8 1036 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 CREB3L3Q68CJ9 461 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 KCTD1Q719H9 257 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 CATIPQ7Z7H3 387 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 TRIB2Q92519 343 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 DDX11Q96FC9 970 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 MAP3K14Q99558 947 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 RANBP17Q9H2T7 1088 aaKnown RBP9.27□□□□□ -0.93
DDX39B-218ENST00000478365 ACAD9Q9H845 621 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
DDX39B-218ENST00000478365 DDAH1O94760 285 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 CALM1P0DP23 149 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 CALM2P0DP24 149 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 CALM3P0DP25 149 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
DDX39B-218ENST00000478365 KIF5BP33176 963 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 GNAQP50148 359 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 FGD1P98174 961 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 NECTIN1Q15223 517 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 SEC23AQ15436 765 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 TMEM67Q5HYA8 995 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 MB21D2Q8IYB1 491 aaPredicted RBP9.26□□□□□ -0.93
DDX39B-218ENST00000478365 CPXCR1Q8N123 301 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 ANKRD35Q8N283 1001 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 MPHOSPH6Q99547 160 aaKnown RBP9.26□□□□□ -0.93
DDX39B-218ENST00000478365 PAK6Q9NQU5 681 aaPredicted RBP9.26□□□□□ -0.93
DDX39B-218ENST00000478365 CCPG1Q9ULG6 757 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 SYNGAP1Q96PV0 1343 aa9.26□□□□□ -0.93
DDX39B-218ENST00000478365 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 MYH6P13533 1939 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 CENPFP49454 3210 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 B4DLN1 442 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 SGPL1O95470 568 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 PSMA5P28066 241 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 LIFRP42702 1097 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 MRPL12P52815 198 aaKnown RBP9.25□□□□□ -0.93
DDX39B-218ENST00000478365 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 SAMD3Q8N6K7 520 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 U2AF1L4Q8WU68 220 aaKnown RBP9.25□□□□□ -0.93
DDX39B-218ENST00000478365 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 RAVER2Q9HCJ3 691 aaKnown RBP9.25□□□□□ -0.93
DDX39B-218ENST00000478365 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 RNF146Q9NTX7 359 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 MTMR7Q9Y216 660 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 CNPY2Q9Y2B0 182 aa9.25□□□□□ -0.93
DDX39B-218ENST00000478365 DNAJC25-GNG10A0A024R161 153 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 CCDC69A6NI79 296 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 ASB14A6NK59 587 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 PRC1O43663 620 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 DHX16O60231 1041 aaKnown RBP9.24□□□□□ -0.93
DDX39B-218ENST00000478365 PEX10O60683 326 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 SMARCA1P28370 1054 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 RCAN1P53805 252 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 GRM4Q14833 912 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 PPP2R5BQ15173 497 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 MTFR1Q15390 333 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 ZNF792Q3KQV3 632 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 CYB5R4Q7L1T6 521 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 MCF2L2Q86YR7 1114 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 TEX2Q8IWB9 1127 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 RGS22Q8NE09 1264 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 CTCFLQ8NI51 663 aaPredicted RBP9.24□□□□□ -0.93
DDX39B-218ENST00000478365 MAML3Q96JK9 1138 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 NEK1Q96PY6 1258 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 TINF2Q9BSI4 451 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 HTATIP2Q9BUP3 242 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 MAP3K20Q9NYL2 800 aaKnown RBP9.24□□□□□ -0.93
DDX39B-218ENST00000478365 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
DDX39B-218ENST00000478365 ABCB11O95342 1321 aa9.24□□□□□ -0.93
DDX39B-218ENST00000478365 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
DDX39B-218ENST00000478365 POTEFA5A3E0 1075 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 KLRF2D3W0D1 207 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 SEPT4O43236 478 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 COBLO75128 1261 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 FARP2O94887 1054 aaPredicted RBP9.23□□□□□ -0.93
DDX39B-218ENST00000478365 IGHA2P01877 340 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
DDX39B-218ENST00000478365 ALAS1P13196 640 aa9.23□□□□□ -0.93
DDX39B-218ENST00000478365 CYBAP13498 195 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms