RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 KCNH6Q9H252 994 aa11.39□□□□□ -0.59
TCTN3-205ENST00000478245 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
TCTN3-205ENST00000478245 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
TCTN3-205ENST00000478245 COL4A4P53420 1690 aaPredicted RBP11.39□□□□□ -0.59
TCTN3-205ENST00000478245 TRIP12Q14669 1992 aaPredicted RBP11.38□□□□□ -0.59
TCTN3-205ENST00000478245 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 B4GALT4O60513 344 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 PFKMP08237 780 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 EVX2Q03828 476 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 SEZ6LQ9BYH1 1024 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 AP5M1Q9H0R1 490 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
TCTN3-205ENST00000478245 TET1Q8NFU7 2136 aa11.38□□□□□ -0.59
TCTN3-205ENST00000478245 DNAJC25-GNG10A0A024R161 153 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 PNMA6EA0A0J9YXQ4 647 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 CTAGE5O15320 804 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 ZEB2O60315 1214 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 GNAI2P04899 355 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 AKR1B1P15121 316 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 FSCN1Q16658 493 aaKnown RBP11.37□□□□□ -0.59
TCTN3-205ENST00000478245 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 TMED8Q6PL24 325 aaPredicted RBP11.37□□□□□ -0.59
TCTN3-205ENST00000478245 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
TCTN3-205ENST00000478245 CFAP54Q96N23 3096 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 CYP2D6P10635 497 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 EEF2P13639 858 aaKnown RBP11.36□□□□□ -0.59
TCTN3-205ENST00000478245 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 CPXCR1Q8N123 301 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 PHOSPHO2Q8TCD6 241 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 DYNLL2Q96FJ2 89 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 CCDC17Q96LX7 622 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
TCTN3-205ENST00000478245 FTOQ9C0B1 505 aaKnown RBP eCLIP11.36□□□□□ -0.59
TCTN3-205ENST00000478245 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
TCTN3-205ENST00000478245 RIPK3Q9Y572 518 aa11.36□□□□□ -0.59
TCTN3-205ENST00000478245 ZNF536O15090 1300 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-205ENST00000478245 ARHGEF15O94989 841 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 KCNA5P22460 613 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 PSMC6P62333 389 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 NKX3-2P78367 333 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 HERC6Q8IVU3 1022 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 SDR42E1Q8WUS8 393 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 VWCEQ96DN2 955 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 CCDC8Q9H0W5 538 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-205ENST00000478245 ANTXR1Q9H6X2 564 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 LMCD1Q9NZU5 365 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 DBNLQ9UJU6 430 aaKnown RBP11.35□□□□□ -0.59
TCTN3-205ENST00000478245 PTPRZ1P23471 2315 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-205ENST00000478245 PTPRSQ13332 1948 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 MYH4Q9Y623 1939 aa11.35□□□□□ -0.59
TCTN3-205ENST00000478245 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 DYNC1LI2O43237 492 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 DCXO43602 365 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 LPXNO60711 386 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 ZBED4O75132 1171 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 CYP2C9P11712 490 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 LEXMQ3ZCV2 418 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 PTCRAQ6ISU1 281 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 AMOTL1Q8IY63 956 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 GDPD5Q8WTR4 605 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 TLR7Q9NYK1 1049 aaKnown RBP11.34□□□□□ -0.59
TCTN3-205ENST00000478245 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 TANC1Q9C0D5 1861 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 ASTN1O14525 1302 aa11.34□□□□□ -0.59
TCTN3-205ENST00000478245 SIP14410 1827 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
TCTN3-205ENST00000478245 IL9P15248 144 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 RFC2P35250 354 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 KCNJ6P48051 423 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 CDK8P49336 464 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 SLC9C2Q5TAH2 1124 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 SPRED2Q7Z698 418 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
TCTN3-205ENST00000478245 RETREG2Q8NC44 543 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.33□□□□□ -0.6
TCTN3-205ENST00000478245 FGD4Q96M96 766 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
TCTN3-205ENST00000478245 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
TCTN3-205ENST00000478245 TNKSO95271 1327 aa11.33□□□□□ -0.6
TCTN3-205ENST00000478245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.32□□□□□ -0.6
TCTN3-205ENST00000478245 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms