RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SGPL1O95470 568 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 IGHA2P01877 340 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 ANTXR2P58335 489 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
HMGA1-206ENST00000478214 OLFML2BQ68BL8 750 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
HMGA1-206ENST00000478214 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 RANBP17Q9H2T7 1088 aaKnown RBP18.26■□□□□ 0.51
HMGA1-206ENST00000478214 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 ZNF236Q9UL36 1845 aa18.26■□□□□ 0.51
HMGA1-206ENST00000478214 TAL1P17542 331 aaPredicted RBP18.25■□□□□ 0.51
HMGA1-206ENST00000478214 CCND3P30281 292 aaPredicted RBP18.25■□□□□ 0.51
HMGA1-206ENST00000478214 COL9A3Q14050 684 aaPredicted RBP18.25■□□□□ 0.51
HMGA1-206ENST00000478214 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 DDX11Q96FC9 970 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 MAML3Q96JK9 1138 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 UBA5Q9GZZ9 404 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 SENP2Q9HC62 589 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 FBXO40Q9UH90 709 aa18.25■□□□□ 0.51
HMGA1-206ENST00000478214 ERICH2A1L162 156 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
HMGA1-206ENST00000478214 ALAS1P13196 640 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.514e-6■■■■□ 26
HMGA1-206ENST00000478214 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 RNF146Q9NTX7 359 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 CCPG1Q9ULG6 757 aa18.24■□□□□ 0.51
HMGA1-206ENST00000478214 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 ICAM1P05362 532 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 WTAPQ15007 396 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 SART3Q15020 963 aaKnown RBP18.23■□□□□ 0.51
HMGA1-206ENST00000478214 TKFCQ3LXA3 575 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 TMEM67Q5HYA8 995 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 IGDCC4Q8TDY8 1250 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 CRISPLD2Q9H0B8 497 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 ACAD9Q9H845 621 aa18.23■□□□□ 0.51
HMGA1-206ENST00000478214 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
HMGA1-206ENST00000478214 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
HMGA1-206ENST00000478214 PRC1O43663 620 aa18.22■□□□□ 0.51
HMGA1-206ENST00000478214 PARP1P09874 1014 aaKnown RBP18.22■□□□□ 0.51
HMGA1-206ENST00000478214 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
HMGA1-206ENST00000478214 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
HMGA1-206ENST00000478214 RNF20Q5VTR2 975 aa18.22■□□□□ 0.51
HMGA1-206ENST00000478214 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
HMGA1-206ENST00000478214 DIS3Q9Y2L1 958 aaKnown RBP18.22■□□□□ 0.51
HMGA1-206ENST00000478214 CYBAP13498 195 aa18.21■□□□□ 0.51
HMGA1-206ENST00000478214 MCM5P33992 734 aa18.21■□□□□ 0.51
HMGA1-206ENST00000478214 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
HMGA1-206ENST00000478214 TINF2Q9BSI4 451 aa18.21■□□□□ 0.51
HMGA1-206ENST00000478214 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
HMGA1-206ENST00000478214 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
HMGA1-206ENST00000478214 CNGA1P29973 690 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 CNTN2Q02246 1040 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 LHX8Q68G74 356 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 UBE2Q1Q7Z7E8 422 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 ADGRF4Q8IZF3 695 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 MAD2L2Q9UI95 211 aa18.2■□□□□ 0.5
HMGA1-206ENST00000478214 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 POTEB2H3BUK9 544 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 TROAPQ12815 778 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 NSMFQ6X4W1 530 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 FGD4Q96M96 766 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 JMJD4Q9H9V9 463 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 ZNFX1Q9P2E3 1918 aaKnown RBP18.19■□□□□ 0.5
HMGA1-206ENST00000478214 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
HMGA1-206ENST00000478214 PALM3A6NDB9 673 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-206ENST00000478214 NFIBO00712 420 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-206ENST00000478214 DHX16O60231 1041 aaKnown RBP18.18■□□□□ 0.5
HMGA1-206ENST00000478214 CAPN2P17655 700 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 GRM4Q14833 912 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 CDC37Q16543 378 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-206ENST00000478214 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 TSGA10IPQ3SY00 556 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 FAM133AQ8N9E0 248 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 NEK1Q96PY6 1258 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 MTA3Q9BTC8 594 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 CYP39A1Q9NYL5 469 aa18.18■□□□□ 0.5
HMGA1-206ENST00000478214 DDX20Q9UHI6 824 aaKnown RBP18.18■□□□□ 0.5
HMGA1-206ENST00000478214 PDE4DIPQ5VU43 2346 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 QRICH1Q2TAL8 776 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 USH1GQ495M9 461 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 ANO1Q5XXA6 986 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 MAMDC4Q6UXC1 1216 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
HMGA1-206ENST00000478214 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
HMGA1-206ENST00000478214 CLEC4DQ8WXI8 215 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 PNMA2Q9UL42 364 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 PFASO15067 1338 aa18.17■□□□□ 0.5
HMGA1-206ENST00000478214 SOWAHBA6NEL2 793 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 SEPT4O43236 478 aa18.16■□□□□ 0.5
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