RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 SNRNP48Q6IEG0 339 aaKnown RBP12.01□□□□□ -0.49
HDAC6-222ENST00000478095 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 KCNB2Q92953 911 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 HTTP42858 3142 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 PLA2G6O60733 806 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
HDAC6-222ENST00000478095 ELNP15502 786 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 SLC9C1Q4G0N8 1177 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
HDAC6-222ENST00000478095 BTNL9Q6UXG8 535 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 SHCBP1Q8NEM2 672 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 NUP133Q8WUM0 1156 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 TMEM87BQ96K49 555 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 HOMER2Q9NSB8 354 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 GJD2Q9UKL4 321 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 IVNS1ABPQ9Y6Y0 642 aa12□□□□□ -0.49
HDAC6-222ENST00000478095 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 CCDC85CA6NKD9 419 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 EPB41L2O43491 1005 aaKnown RBP11.99□□□□□ -0.49
HDAC6-222ENST00000478095 DHX16O60231 1041 aaKnown RBP11.99□□□□□ -0.49
HDAC6-222ENST00000478095 SLC25A27O95847 323 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 RXRAP19793 462 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 PTPREP23469 700 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 GRK4P32298 578 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 MORN1Q5T089 497 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 IER5LQ5T953 404 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 BLOC1S2Q6QNY1 142 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 DHX32Q7L7V1 743 aaKnown RBP11.99□□□□□ -0.49
HDAC6-222ENST00000478095 ZNF654Q8IZM8 581 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 MROH8Q9H579 483 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 ZNF536O15090 1300 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 A0A0G2JMZ2 1700 aa11.99□□□□□ -0.49
HDAC6-222ENST00000478095 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 SLC15A5A6NIM6 579 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 ADCY3O60266 1144 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
HDAC6-222ENST00000478095 FDX1P10109 184 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 ALAS1P13196 640 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
HDAC6-222ENST00000478095 ADORA2AP29274 412 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 RGS2P41220 211 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 OAZ1P54368 228 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
HDAC6-222ENST00000478095 TROAPQ12815 778 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 IRF5Q13568 498 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 GRB14Q14449 540 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 GRM4Q14833 912 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 CCDC144CPQ8IYA2 1237 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 MMP19Q99542 508 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 RANBP17Q9H2T7 1088 aaKnown RBP11.98□□□□□ -0.49
HDAC6-222ENST00000478095 VAT1LQ9HCJ6 419 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 BIN2Q9UBW5 565 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-222ENST00000478095 MAD2L2Q9UI95 211 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 RLFQ13129 1914 aa11.98□□□□□ -0.49
HDAC6-222ENST00000478095 WDR19Q8NEZ3 1342 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-222ENST00000478095 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 DDAH1O94760 285 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 PGK2P07205 417 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 FCER1AP12319 257 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 COPB2P35606 906 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 LIFRP42702 1097 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 FGD1P98174 961 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 TRIM32Q13049 653 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 KCTD2Q14681 263 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-222ENST00000478095 CCL14Q16627 93 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 ADGRF4Q8IZF3 695 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 NPLOC4Q8TAT6 608 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 TRIB2Q92519 343 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 USP6NLQ92738 828 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 ARMC5Q96C12 935 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 APBA2Q99767 749 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 UPF3BQ9BZI7 483 aaKnown RBP11.97□□□□□ -0.49
HDAC6-222ENST00000478095 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
HDAC6-222ENST00000478095 STRNO43815 780 aa11.96□□□□□ -0.49
HDAC6-222ENST00000478095 COBLO75128 1261 aa11.96□□□□□ -0.49
HDAC6-222ENST00000478095 INHAP05111 366 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms