RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 DDX11Q96FC9 970 aa26.68■■□□□ 1.86
TRAF4-211ENST00000478021 ANO2Q9NQ90 1003 aa26.68■■□□□ 1.86
TRAF4-211ENST00000478021 SMCHD1A6NHR9 2005 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 ALAS1P13196 640 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 CNGA1P29973 690 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 ZNF792Q3KQV3 632 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 RALYLQ86SE5 291 aaKnown RBP26.67■■□□□ 1.86
TRAF4-211ENST00000478021 ANKS1AQ92625 1134 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 RNF146Q9NTX7 359 aa26.67■■□□□ 1.86
TRAF4-211ENST00000478021 CDC45O75419 566 aa26.66■■□□□ 1.86
TRAF4-211ENST00000478021 PRAMEF19Q5SWL8 479 aa26.66■■□□□ 1.86
TRAF4-211ENST00000478021 IFIT1BQ5T764 474 aaKnown RBP26.66■■□□□ 1.86
TRAF4-211ENST00000478021 CHST13Q8NET6 341 aa26.66■■□□□ 1.86
TRAF4-211ENST00000478021 NCOA7Q8NI08 942 aa26.66■■□□□ 1.86
TRAF4-211ENST00000478021 RANBP17Q9H2T7 1088 aaKnown RBP26.66■■□□□ 1.86
TRAF4-211ENST00000478021 FBXO40Q9UH90 709 aa26.66■■□□□ 1.86
TRAF4-211ENST00000478021 CYBAP13498 195 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 SEC23AQ15436 765 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 UBE2Q1Q7Z7E8 422 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 ANKRD35Q8N283 1001 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 DIS3LQ8TF46 1054 aaKnown RBP26.65■■□□□ 1.86
TRAF4-211ENST00000478021 CPVLQ9H3G5 476 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 ACAD9Q9H845 621 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 CCPG1Q9ULG6 757 aa26.65■■□□□ 1.86
TRAF4-211ENST00000478021 CHST3Q7LGC8 479 aa26.64■■□□□ 1.86
TRAF4-211ENST00000478021 TRERF1Q96PN7 1200 aa26.64■■□□□ 1.86
TRAF4-211ENST00000478021 UBA5Q9GZZ9 404 aa26.64■■□□□ 1.86
TRAF4-211ENST00000478021 PPP4R2Q9NY27 417 aa26.64■■□□□ 1.86
TRAF4-211ENST00000478021 MKI67P46013 3256 aaKnown RBP26.63■■□□□ 1.85
TRAF4-211ENST00000478021 DNAJC25-GNG10A0A024R161 153 aa26.63■■□□□ 1.85
TRAF4-211ENST00000478021 MUM1L1Q5H9M0 696 aa26.63■■□□□ 1.85
TRAF4-211ENST00000478021 GPATCH4Q5T3I0 446 aaKnown RBP26.63■■□□□ 1.85
TRAF4-211ENST00000478021 LHX8Q68G74 356 aa26.63■■□□□ 1.85
TRAF4-211ENST00000478021 CASC1Q6TDU7 716 aa26.63■■□□□ 1.85
TRAF4-211ENST00000478021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.63■■□□□ 1.85
TRAF4-211ENST00000478021 OGDHLQ9ULD0 1010 aa26.63■■□□□ 1.85
TRAF4-211ENST00000478021 DIS3Q9Y2L1 958 aaKnown RBP26.63■■□□□ 1.85
TRAF4-211ENST00000478021 IFIT3O14879 490 aaKnown RBP26.62■■□□□ 1.85
TRAF4-211ENST00000478021 SLC27A2O14975 620 aa26.62■■□□□ 1.85
TRAF4-211ENST00000478021 ICAM1P05362 532 aa26.62■■□□□ 1.85
TRAF4-211ENST00000478021 TKFCQ3LXA3 575 aa26.62■■□□□ 1.85
TRAF4-211ENST00000478021 PAWRQ96IZ0 340 aaKnown RBP26.62■■□□□ 1.85
TRAF4-211ENST00000478021 TINF2Q9BSI4 451 aa26.62■■□□□ 1.85
TRAF4-211ENST00000478021 DDX20Q9UHI6 824 aaKnown RBP26.62■■□□□ 1.85
TRAF4-211ENST00000478021 ANTXR2P58335 489 aa26.61■■□□□ 1.85
TRAF4-211ENST00000478021 ANO1Q5XXA6 986 aa26.61■■□□□ 1.85
TRAF4-211ENST00000478021 CREB3L3Q68CJ9 461 aa26.61■■□□□ 1.85
TRAF4-211ENST00000478021 MB21D2Q8IYB1 491 aaPredicted RBP26.61■■□□□ 1.85
TRAF4-211ENST00000478021 SENP2Q9HC62 589 aa26.61■■□□□ 1.85
TRAF4-211ENST00000478021 A1CFQ9NQ94 594 aaKnown RBP26.61■■□□□ 1.85
TRAF4-211ENST00000478021 MCM3APO60318 1980 aa26.6■■□□□ 1.85
TRAF4-211ENST00000478021 CAPN2P17655 700 aa26.6■■□□□ 1.85
TRAF4-211ENST00000478021 CNTN2Q02246 1040 aa26.6■■□□□ 1.85
TRAF4-211ENST00000478021 ASPRV1Q53RT3 343 aa26.6■■□□□ 1.85
TRAF4-211ENST00000478021 ANKLE1Q8NAG6 615 aa26.6■■□□□ 1.85
TRAF4-211ENST00000478021 ERICH2A1L162 156 aa26.59■■□□□ 1.85
TRAF4-211ENST00000478021 PARP1P09874 1014 aaKnown RBP26.59■■□□□ 1.85
TRAF4-211ENST00000478021 MNX1P50219 401 aaPredicted RBP26.59■■□□□ 1.85
TRAF4-211ENST00000478021 NECTIN1Q15223 517 aa26.59■■□□□ 1.85
TRAF4-211ENST00000478021 FGD4Q96M96 766 aa26.59■■□□□ 1.85
TRAF4-211ENST00000478021 WTAPQ15007 396 aa26.58■■□□□ 1.85
TRAF4-211ENST00000478021 TMEM67Q5HYA8 995 aa26.58■■□□□ 1.85
TRAF4-211ENST00000478021 NSMFQ6X4W1 530 aa26.58■■□□□ 1.85
TRAF4-211ENST00000478021 NECAB2Q7Z6G3 386 aa26.58■■□□□ 1.85
TRAF4-211ENST00000478021 LCTP09848 1927 aa26.58■■□□□ 1.85
TRAF4-211ENST00000478021 MYH6P13533 1939 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 ALPK3Q96L96 1907 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 POTEB2H3BUK9 544 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 SEPT4O43236 478 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 MSCO60682 206 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 COL9A3Q14050 684 aaPredicted RBP26.57■■□□□ 1.84
TRAF4-211ENST00000478021 SART3Q15020 963 aaKnown RBP26.57■■□□□ 1.84
TRAF4-211ENST00000478021 PRPF38BQ5VTL8 546 aaKnown RBP26.57■■□□□ 1.84
TRAF4-211ENST00000478021 ERICH6BQ5W0A0 696 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 ADGRF4Q8IZF3 695 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 STAG2Q8N3U4 1231 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 DPF3Q92784 378 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 HTATIP2Q9BUP3 242 aa26.57■■□□□ 1.84
TRAF4-211ENST00000478021 DHX16O60231 1041 aaKnown RBP26.56■■□□□ 1.84
TRAF4-211ENST00000478021 SLC34A2O95436 690 aa26.56■■□□□ 1.84
TRAF4-211ENST00000478021 VAT1LQ9HCJ6 419 aa26.56■■□□□ 1.84
TRAF4-211ENST00000478021 CNPY2Q9Y2B0 182 aa26.56■■□□□ 1.84
TRAF4-211ENST00000478021 NFIBO00712 420 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 PRC1O43663 620 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 SNAI1O95863 264 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-211ENST00000478021 CDC37Q16543 378 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-211ENST00000478021 USH1GQ495M9 461 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 ZNF467Q7Z7K2 595 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-211ENST00000478021 FAM133AQ8N9E0 248 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 C11orf49Q9H6J7 331 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 GPHNQ9NQX3 736 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-211ENST00000478021 CYP39A1Q9NYL5 469 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 PFASO15067 1338 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 SYNGAP1Q96PV0 1343 aa26.55■■□□□ 1.84
TRAF4-211ENST00000478021 SOWAHBA6NEL2 793 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 ZNF865P0CJ78 1059 aaPredicted RBP26.54■■□□□ 1.84
TRAF4-211ENST00000478021 MAMDC4Q6UXC1 1216 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 MSL3Q8N5Y2 521 aaKnown RBP26.54■■□□□ 1.84
TRAF4-211ENST00000478021 IGDCC4Q8TDY8 1250 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 PURBQ96QR8 312 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms