RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-208ENST00000477928 SGSM2O43147 1006 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 EVI5O60447 810 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 SYN1P17600 705 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 PTH1RQ03431 593 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 GPCPD1Q9NPB8 672 aa16.25■□□□□ 0.19
SOX2-OT-208ENST00000477928 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 B4E1Z4 1266 aa16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 KDM4AO75164 1064 aa16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 PNMA2Q9UL42 364 aa16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 CTDP1Q9Y5B0 961 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-208ENST00000477928 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 ANKS1AQ92625 1134 aa16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-208ENST00000477928 ASTN1O14525 1302 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ZNFX1Q9P2E3 1918 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 SEPT4O43236 478 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ADCY6O43306 1168 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 SLC34A2O95436 690 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ZNF865P0CJ78 1059 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 PDHBP11177 359 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ALAS1P13196 640 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 PTGS1P23219 599 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 MAP4K1Q92918 833 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 DDX11Q96FC9 970 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 SENP6Q9GZR1 1112 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 FBXO40Q9UH90 709 aa16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 DIS3Q9Y2L1 958 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-208ENST00000477928 ALPK3Q96L96 1907 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 PGK1P00558 417 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 TRDNQ13061 729 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 TKFCQ3LXA3 575 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 PRO3102Q9H379 93 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
SOX2-OT-208ENST00000477928 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 TRIOBPQ9H2D6 2365 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 SOWAHBA6NEL2 793 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 COL9A3Q14050 684 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 LRRC41Q15345 812 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 CYB5R4Q7L1T6 521 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 FERMT2Q96AC1 680 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 TRERF1Q96PN7 1200 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 NRBP1Q9UHY1 535 aa16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-208ENST00000477928 MYADML2A6NDP7 307 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 MSCO60682 206 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 ENAHQ8N8S7 591 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 ACAD9Q9H845 621 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 ZSWIM5Q9P217 1185 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 TNKSO95271 1327 aa16.19■□□□□ 0.18
SOX2-OT-208ENST00000477928 FRMPD3Q5JV73 1810 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 DNM1LO00429 736 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 NFIBO00712 420 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 CYP21A2P08686 494 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 ARMCX2Q7L311 632 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms