RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 VIL1P09327 827 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 LIG1P18858 919 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 GNA11P29992 359 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 SNW1Q13573 536 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 AXDND1Q5T1B0 1012 aaPredicted RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 GPATCH4Q5T3I0 446 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 RSBN1LQ6PCB5 846 aaPredicted RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 RAB11FIP4Q86YS3 637 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 FMR1NBQ8N0W7 255 aaPredicted RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 OGFOD1Q8N543 542 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 SRBD1Q8N5C6 995 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 KRI1Q8N9T8 703 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 FSIP1Q8NA03 581 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 MKL1Q969V6 931 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 DYNLL2Q96FJ2 89 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 NAT10Q9H0A0 1025 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 RBSNQ9H1K0 784 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 DBNDD1Q9H9R9 158 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 NMRK2Q9NPI5 230 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 GINM1Q9NU53 330 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 MTMR4Q9NYA4 1195 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 FAM13BQ9NYF5 915 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 MAD2L2Q9UI95 211 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 HERC5Q9UII4 1024 aaKnown RBP7.64□□□□□ -1.19
LDB3-206ENST00000477489 STX8Q9UNK0 236 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 HPSEQ9Y251 543 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 PCNTO95613 3336 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 MYH4Q9Y623 1939 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 SIPA1L1O43166 1804 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 BTBD18B2RXH4 712 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 PLEKHA8P1O95397 391 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 KCNA3P22001 575 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 RPS12P25398 132 aaKnown RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 GUCY1A2P33402 732 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 SHMT1P34896 483 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TRAF1Q13077 416 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 STX1AQ16623 288 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 AOC3Q16853 763 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 CT47A1Q5JQC4 288 aaPredicted RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 RESP18Q5W5W9 173 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 ARL6IP4Q66PJ3 421 aaKnown RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 MCTP2Q6DN12 878 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 OTUD7BQ6GQQ9 843 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TATDN1Q6P1N9 297 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TMEM179Q6ZVK1 233 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 SLC51AQ86UW1 340 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 NIM1KQ8IY84 436 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 STK11IPQ8N1F8 1099 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 LARGE2Q8N3Y3 721 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TRIM44Q96DX7 344 aaPredicted RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 CEP95Q96GE4 821 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 AIFM3Q96NN9 605 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 GMLQ99445 158 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 PRR14Q9BWN1 585 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 TRIM34Q9BYJ4 488 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 RIOX1Q9H6W3 641 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 KANSL2Q9H9L4 492 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 ANO10Q9NW15 660 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 BARHL2Q9NY43 387 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 NYAP2Q9P242 653 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 SEC63Q9UGP8 760 aaKnown RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 SAP30BPQ9UHR5 308 aaKnown RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 ZNRF3Q9ULT6 936 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 PCDHA4Q9UN74 947 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 SRPRBQ9Y5M8 271 aaKnown RBP7.63□□□□□ -1.19
LDB3-206ENST00000477489 CLIC4Q9Y696 253 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 ADAMTSL1Q8N6G6 1762 aa7.63□□□□□ -1.19
LDB3-206ENST00000477489 KLRF2D3W0D1 207 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 SMIM22K7EJ46 135 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 GPR37O15354 613 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 MYO1BO43795 1136 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 C21orf2O43822 256 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 NMT2O60551 498 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 NR1I2O75469 434 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 OATP04181 439 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 TPM3P06753 285 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 PDHBP11177 359 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 DPEP1P16444 411 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 SYKP43405 635 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 NLRP5P59047 1200 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 COPS2P61201 443 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 TYRO3Q06418 890 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 PICALMQ13492 652 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 TNIP1Q15025 636 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 DALRD3Q5D0E6 543 aaKnown RBP7.62□□□□□ -1.19
LDB3-206ENST00000477489 OLFM4Q6UX06 510 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 KRT25Q7Z3Z0 450 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 FAM83AQ86UY5 434 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 KIAA0825Q8IV33 1275 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 BLIDQ8IZY5 108 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 SLC44A5Q8NCS7 719 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 GMCL1P1Q8NEA9 526 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 PXYLP1Q8TE99 480 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 DCAF4Q8WV16 495 aa7.62□□□□□ -1.19
LDB3-206ENST00000477489 RRP36Q96EU6 259 aaKnown RBP7.62□□□□□ -1.19
LDB3-206ENST00000477489 NAP1L4Q99733 375 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms