RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TEKT1Q969V4 418 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 MTFR1LQ9H019 292 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 USP40Q9NVE5 1235 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 RASA1P20936 1047 aa18.6■□□□□ 0.57
TMEM53-208ENST00000476724 IL17AQ16552 155 aa18.6■□□□□ 0.57
TMEM53-208ENST00000476724 CDC42EP5Q6NZY7 148 aa18.6■□□□□ 0.57
TMEM53-208ENST00000476724 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
TMEM53-208ENST00000476724 BARHL2Q9NY43 387 aa18.6■□□□□ 0.57
TMEM53-208ENST00000476724 PPP2R2CQ9Y2T4 447 aa18.6■□□□□ 0.57
TMEM53-208ENST00000476724 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
TMEM53-208ENST00000476724 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 FKBP1AP62942 108 aaKnown RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 KLHL10Q6JEL2 608 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 TRIM65Q6PJ69 517 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 APTXQ7Z2E3 356 aaKnown RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 PANX2Q96RD6 677 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 TMEM47Q9BQJ4 181 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 NAA15Q9BXJ9 866 aaKnown RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 AKR1B15C9JRZ8 316 aaPredicted RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 MYL1P05976 194 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 CDK8P49336 464 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 DTHD1Q6ZMT9 781 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 C16orf86Q6ZW13 317 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 RTKN2Q8IZC4 609 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 SPZ1Q9BXG8 430 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
TMEM53-208ENST00000476724 PCDHA6Q9UN73 950 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 PCDHA8Q9Y5H6 950 aa18.59■□□□□ 0.57
TMEM53-208ENST00000476724 SPAG1Q07617 926 aa18.58■□□□□ 0.57
TMEM53-208ENST00000476724 ZNF658Q5TYW1 1059 aaPredicted RBP18.58■□□□□ 0.57
TMEM53-208ENST00000476724 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.57
TMEM53-208ENST00000476724 PSMD1Q99460 953 aa18.58■□□□□ 0.57
TMEM53-208ENST00000476724 RWDD2AQ9UIY3 292 aa18.58■□□□□ 0.57
TMEM53-208ENST00000476724 STX8Q9UNK0 236 aa18.58■□□□□ 0.57
TMEM53-208ENST00000476724 LRRC10BA6NIK2 292 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 POLD1P28340 1107 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 CASP1P29466 404 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 PRPHP41219 470 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 NFIAQ12857 509 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 WWC2Q6AWC2 1192 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 PPFIBP1Q86W92 1011 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.56
TMEM53-208ENST00000476724 PPP1R1BQ9UD71 204 aaPredicted RBP18.58■□□□□ 0.56
TMEM53-208ENST00000476724 DNAI1Q9UI46 699 aa18.58■□□□□ 0.56
TMEM53-208ENST00000476724 STXBP3O00186 592 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 PBX1P40424 430 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 ADKP55263 362 aaKnown RBP18.57■□□□□ 0.56
TMEM53-208ENST00000476724 STX17P56962 302 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 TGFB2P61812 414 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 GOLGA8FQ08AF8 430 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 GOLGA8DPQ0D2H9 430 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 NAA30Q147X3 362 aaPredicted RBP18.57■□□□□ 0.56
TMEM53-208ENST00000476724 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 PIM2Q9P1W9 311 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.57■□□□□ 0.56
TMEM53-208ENST00000476724 MYH8P13535 1937 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 ITIH6Q6UXX5 1313 aa18.57■□□□□ 0.56
TMEM53-208ENST00000476724 KLRF2D3W0D1 207 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 ADAMTS3O15072 1205 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 CYTH3O43739 400 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 STAT6P42226 847 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 CACNB3P54284 484 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 ANKRD20A12PQ8NF67 263 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.56
TMEM53-208ENST00000476724 CCSER1Q9C0I3 900 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 RBM5P52756 815 aaKnown RBP eCLIP18.56■□□□□ 0.56
TMEM53-208ENST00000476724 PAK1Q13153 545 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 PTPN21Q16825 1174 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 TYW1BQ6NUM6 668 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 HEATR3Q7Z4Q2 680 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 LARGE2Q8N3Y3 721 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 IGSF22Q8N9C0 903 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 CCDC51Q96ER9 411 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 MTRQ99707 1265 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 ARID3AQ99856 593 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 DISC1Q9NRI5 854 aa18.56■□□□□ 0.56
TMEM53-208ENST00000476724 LIMA1Q9UHB6 759 aaKnown RBP18.56■□□□□ 0.56
TMEM53-208ENST00000476724 RPN1P04843 607 aaKnown RBP18.55■□□□□ 0.56
TMEM53-208ENST00000476724 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
TMEM53-208ENST00000476724 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
TMEM53-208ENST00000476724 SMAP1Q8IYB5 467 aaPredicted RBP18.55■□□□□ 0.56
TMEM53-208ENST00000476724 STAMQ92783 540 aa18.55■□□□□ 0.56
TMEM53-208ENST00000476724 CTNND2Q9UQB3 1225 aa18.55■□□□□ 0.56
TMEM53-208ENST00000476724 TEX33O43247 280 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 RAD17O75943 681 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 TPM1P09493 284 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 GNA11P29992 359 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 KCNB1Q14721 858 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 KRT25Q7Z3Z0 450 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
TMEM53-208ENST00000476724 AK8Q96MA6 479 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms