RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TUBB4BP68371 445 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 MAP2K1Q02750 393 aaPredicted RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 IFIT5Q13325 482 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 SEC23AQ15436 765 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 TUSC1Q2TAM9 212 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 RILPL1Q5EBL4 403 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 KANK3Q6NY19 840 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 CPLX2Q6PUV4 134 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 RALYLQ86SE5 291 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 CRACR2BQ8N4Y2 399 aaPredicted RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 WASF1Q92558 559 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 TNFRSF25Q93038 417 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 SHISA4Q96DD7 197 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 AIFM3Q96NN9 605 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 CNNM2Q9H8M5 875 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 ZNF408Q9H9D4 720 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 FANCLQ9NW38 375 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 AATFQ9NY61 560 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBR4-212ENST00000475973 PSD3Q9NYI0 1048 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 ZSWIM5Q9P217 1185 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 CNOT7Q9UIV1 285 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 PPP2R2CQ9Y2T4 447 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 MRFAP1Q9Y605 127 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 ITIH6Q6UXX5 1313 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 TMEM232C9JQI7 657 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 TRAF5O00463 557 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 CPLX1O14810 134 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 ZBTB43O43298 467 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 NRDCO43847 1150 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 CELF2O95319 508 aaKnown RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 HAND2P61296 217 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 FMR1Q06787 632 aaKnown RBP eCLIP7.81□□□□□ -1.169e-8■■□□□ 13.2
UBR4-212ENST00000475973 SLC20A2Q08357 652 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 GRM1Q13255 1194 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 PNOCQ13519 176 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 NPY5RQ15761 445 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 KIF4BQ2VIQ3 1234 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 SPECC1LQ69YQ0 1117 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 PI16Q6UXB8 463 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 ZNF662Q6ZS27 426 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 TMTC2Q8N394 836 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 MSANTD4Q8NCY6 345 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 LPIN2Q92539 896 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 DCPSQ96C86 337 aaKnown RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 CAPNS2Q96L46 248 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 CLIC6Q96NY7 704 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 NAA15Q9BXJ9 866 aaKnown RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 GLIS2Q9BZE0 524 aaPredicted RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 LIMD1Q9UGP4 676 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 ZHX1Q9UKY1 873 aaPredicted RBP7.81□□□□□ -1.16
UBR4-212ENST00000475973 TLL2Q9Y6L7 1015 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 LAMB2P55268 1798 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
UBR4-212ENST00000475973 ZNF804BA4D1E1 1349 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 MROH5Q6ZUA9 1318 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 ZNF532Q9HCE3 1301 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 SPTLC1O15269 473 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 FOXN1O15353 648 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 SMC2O95347 1197 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 DEXIO95424 95 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 GNAT2P19087 354 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 ITGA6P23229 1130 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 MARCKSP29966 332 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 RFC5P40937 340 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 NT5C2P49902 561 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 PLCD1P51178 756 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 TRDNQ13061 729 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 POSTNQ15063 836 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 PKN1Q16512 942 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 TBC1D10BQ4KMP7 808 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 MUM1L1Q5H9M0 696 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 AKNAD1Q5T1N1 836 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 SLC9C2Q5TAH2 1124 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 CC2D1AQ6P1N0 951 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 KRT26Q7Z3Y9 468 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 PODNQ7Z5L7 613 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 IQUBQ8NA54 791 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 CCDC51Q96ER9 411 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 HHIPL1Q96JK4 782 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 GPR101Q96P66 508 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 RNF26Q9BY78 433 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 FUT8Q9BYC5 575 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 KRT23Q9C075 422 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 GREM2Q9H772 168 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 BSDC1Q9NW68 430 aaPredicted RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 ADD3Q9UEY8 706 aaKnown RBP7.8□□□□□ -1.16
UBR4-212ENST00000475973 PGAP2Q9UHJ9 254 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 MYH3P11055 1940 aa7.8□□□□□ -1.16
UBR4-212ENST00000475973 MYO3BQ8WXR4 1341 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms