RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 CRISPLD2Q9H0B8 497 aa19.3■□□□□ 0.68
ATG4B-216ENST00000475195 GPCPD1Q9NPB8 672 aa19.3■□□□□ 0.68
ATG4B-216ENST00000475195 FBXO40Q9UH90 709 aa19.3■□□□□ 0.68
ATG4B-216ENST00000475195 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-216ENST00000475195 ICAM1P05362 532 aa19.29■□□□□ 0.68
ATG4B-216ENST00000475195 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
ATG4B-216ENST00000475195 U2AF1L4Q8WU68 220 aaKnown RBP19.29■□□□□ 0.68
ATG4B-216ENST00000475195 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
ATG4B-216ENST00000475195 MAML3Q96JK9 1138 aa19.29■□□□□ 0.68
ATG4B-216ENST00000475195 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
ATG4B-216ENST00000475195 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.29■□□□□ 0.682e-7■■■□□ 19.1
ATG4B-216ENST00000475195 IFIT3O14879 490 aaKnown RBP19.28■□□□□ 0.68
ATG4B-216ENST00000475195 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
ATG4B-216ENST00000475195 MFSD14CQ5VZR4 134 aa19.28■□□□□ 0.68
ATG4B-216ENST00000475195 KCNB2Q92953 911 aa19.28■□□□□ 0.68
ATG4B-216ENST00000475195 ISY1Q9ULR0 285 aaKnown RBP19.28■□□□□ 0.68
ATG4B-216ENST00000475195 EPB41L2O43491 1005 aaKnown RBP19.27■□□□□ 0.68
ATG4B-216ENST00000475195 PGK2P07205 417 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 SNAP25P60880 206 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 UBE2Q1Q7Z7E8 422 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 DEFB118Q96PH6 123 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 PNMA2Q9UL42 364 aa19.27■□□□□ 0.68
ATG4B-216ENST00000475195 SMCHD1A6NHR9 2005 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 ERICH2A1L162 156 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 PALM3A6NDB9 673 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-216ENST00000475195 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 CYP2C19P33261 490 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 MCM5P33992 734 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 TROAPQ12815 778 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 COL9A3Q14050 684 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-216ENST00000475195 WTAPQ15007 396 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 SART3Q15020 963 aaKnown RBP19.26■□□□□ 0.67
ATG4B-216ENST00000475195 LHX8Q68G74 356 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 CHST3Q7LGC8 479 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 TMTC2Q8N394 836 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 MSL3Q8N5Y2 521 aaKnown RBP19.26■□□□□ 0.67
ATG4B-216ENST00000475195 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 TMEM87BQ96K49 555 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 TRERF1Q96PN7 1200 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 UBA5Q9GZZ9 404 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 SENP2Q9HC62 589 aa19.26■□□□□ 0.67
ATG4B-216ENST00000475195 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 PARP1P09874 1014 aaKnown RBP19.25■□□□□ 0.67
ATG4B-216ENST00000475195 CCND3P30281 292 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-216ENST00000475195 CCDC174Q6PII3 467 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 ZNF467Q7Z7K2 595 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-216ENST00000475195 RASEFQ8IZ41 740 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 ANKRD35Q8N283 1001 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 MAP3K14Q99558 947 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 RNF146Q9NTX7 359 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 NRBP1Q9UHY1 535 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 MAD2L2Q9UI95 211 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 OGDHLQ9ULD0 1010 aa19.25■□□□□ 0.67
ATG4B-216ENST00000475195 PLXNA1Q9UIW2 1896 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 MKI67P46013 3256 aaKnown RBP19.24■□□□□ 0.67
ATG4B-216ENST00000475195 ALAS1P13196 640 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 CYBAP13498 195 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 HSPA4P34932 840 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 LIFRP42702 1097 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 TMEM67Q5HYA8 995 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 ADGRF4Q8IZF3 695 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 STAG2Q8N3U4 1231 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 TRPV1Q8NER1 839 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 TINF2Q9BSI4 451 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 LY9Q9HBG7 655 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 A1CFQ9NQ94 594 aaKnown RBP19.24■□□□□ 0.67
ATG4B-216ENST00000475195 CCPG1Q9ULG6 757 aa19.24■□□□□ 0.67
ATG4B-216ENST00000475195 PRC1O43663 620 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 TFRCP02786 760 aaKnown RBP19.23■□□□□ 0.67
ATG4B-216ENST00000475195 EXOSC10Q01780 885 aaKnown RBP19.23■□□□□ 0.67
ATG4B-216ENST00000475195 MUM1L1Q5H9M0 696 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 FAM133AQ8N9E0 248 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 ANKLE1Q8NAG6 615 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 MTMR8Q96EF0 704 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 FGD4Q96M96 766 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 MAF1Q9H063 256 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
ATG4B-216ENST00000475195 KLRF2D3W0D1 207 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 SH2B2O14492 632 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-216ENST00000475195 REC8O95072 547 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 KRT32Q14532 448 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 GRM4Q14833 912 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 CLEC4DQ8WXI8 215 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 JMJD4Q9H9V9 463 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 CYP39A1Q9NYL5 469 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 SYNGAP1Q96PV0 1343 aa19.22■□□□□ 0.67
ATG4B-216ENST00000475195 MSCO60682 206 aa19.21■□□□□ 0.67
ATG4B-216ENST00000475195 MNX1P50219 401 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-216ENST00000475195 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
ATG4B-216ENST00000475195 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
ATG4B-216ENST00000475195 RGS22Q8NE09 1264 aa19.21■□□□□ 0.67
ATG4B-216ENST00000475195 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
ATG4B-216ENST00000475195 GPHNQ9NQX3 736 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-216ENST00000475195 PFASO15067 1338 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms