RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ORC4O43929 436 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CALM1P0DP23 149 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CALM2P0DP24 149 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CALM3P0DP25 149 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 GMPSP49915 693 aaPredicted RBP23.91■■□□□ 1.42
SH3D21-202ENST00000474766 NOM1Q5C9Z4 860 aaKnown RBP23.91■■□□□ 1.42
SH3D21-202ENST00000474766 SPECC1LQ69YQ0 1117 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 TEX2Q8IWB9 1127 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 GOLGA6L1Q8N7Z2 621 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 CEP112Q8N8E3 955 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 TC2NQ8N9U0 490 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 PHF20Q9BVI0 1012 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 FANCLQ9NW38 375 aa23.91■■□□□ 1.42
SH3D21-202ENST00000474766 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 USP17L21D6R901 530 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 ERLIN1O75477 346 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 TUBBP07437 444 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 XBP1P17861 261 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 AKAP17AQ02040 695 aaKnown RBP23.9■■□□□ 1.42
SH3D21-202ENST00000474766 NT5DC1Q5TFE4 455 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 MSANTD4Q8NCY6 345 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 DHX58Q96C10 678 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 HOOK1Q9UJC3 728 aaKnown RBP23.9■■□□□ 1.42
SH3D21-202ENST00000474766 MYH13Q9UKX3 1938 aa23.9■■□□□ 1.42
SH3D21-202ENST00000474766 DDAH1O94760 285 aa23.89■■□□□ 1.42
SH3D21-202ENST00000474766 VIL1P09327 827 aaKnown RBP23.89■■□□□ 1.42
SH3D21-202ENST00000474766 VEGFAP15692 232 aaPredicted RBP23.89■■□□□ 1.42
SH3D21-202ENST00000474766 CHMP4BP1P59074 171 aa23.89■■□□□ 1.42
SH3D21-202ENST00000474766 SPECC1Q5M775 1068 aa23.89■■□□□ 1.42
SH3D21-202ENST00000474766 FAM177A1Q8N128 213 aaPredicted RBP23.89■■□□□ 1.42
SH3D21-202ENST00000474766 CABP5Q9NP86 173 aa23.89■■□□□ 1.42
SH3D21-202ENST00000474766 USP17L3A6NCW0 530 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 USP17L4A6NCW7 530 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 PRDM1O75626 825 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 BMP6P22004 513 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 NOP2P46087 812 aaKnown RBP23.89■■□□□ 1.41
SH3D21-202ENST00000474766 BEND6Q5SZJ8 279 aaPredicted RBP23.89■■□□□ 1.41
SH3D21-202ENST00000474766 USP17L1Q7RTZ2 530 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 MXD3Q9BW11 206 aa23.89■■□□□ 1.41
SH3D21-202ENST00000474766 DCP1AQ9NPI6 582 aaPredicted RBP23.89■■□□□ 1.41
SH3D21-202ENST00000474766 CHRM1P11229 460 aaPredicted RBP23.88■■□□□ 1.41
SH3D21-202ENST00000474766 C10orf67Q8IYJ2 551 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 CRNKL1Q9BZJ0 848 aaKnown RBP23.88■■□□□ 1.41
SH3D21-202ENST00000474766 ATP8A2Q9NTI2 1148 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 LCMT1Q9UIC8 334 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 SHTN1A0MZ66 631 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 FOXN1O15353 648 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 EPS15P42566 896 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 SARSP49591 514 aaKnown RBP23.88■■□□□ 1.41
SH3D21-202ENST00000474766 DACT2Q5SW24 774 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 TOGARAM2Q6ZUX3 1019 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 YY1AP1Q9H869 796 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 VPS54Q9P1Q0 977 aa23.88■■□□□ 1.41
SH3D21-202ENST00000474766 PLEKHA8P1O95397 391 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 CCDC175P0C221 793 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 ZNF18P17022 549 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 GTF2IP78347 998 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 POSTNQ15063 836 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 SBK1Q52WX2 424 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 CCDC12Q8WUD4 166 aaPredicted RBP23.87■■□□□ 1.41
SH3D21-202ENST00000474766 GPRC5DQ9NZD1 345 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 MKRN1Q9UHC7 482 aaKnown RBP23.87■■□□□ 1.41
SH3D21-202ENST00000474766 DACH1Q9UI36 760 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 HACL1Q9UJ83 578 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 JAG2Q9Y219 1238 aa23.87■■□□□ 1.41
SH3D21-202ENST00000474766 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
SH3D21-202ENST00000474766 POLR2DO15514 142 aaKnown RBP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 KRT2P35908 639 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 GOLGA8FQ08AF8 430 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 GOLGA8DPQ0D2H9 430 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 STRIP1Q5VSL9 837 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 RSBN1LQ6PCB5 846 aaPredicted RBP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 TMTC3Q6ZXV5 915 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 PANX2Q96RD6 677 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 NAA15Q9BXJ9 866 aaKnown RBP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 CDC23Q9UJX2 597 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 MAST2Q6P0Q8 1798 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 LAMB1P07942 1786 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 IQCA1LA6NCM1 817 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 TRIM75PA6NK02 468 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 PRDX5P30044 214 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 ENOX1Q8TC92 643 aaKnown RBP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 GBP3Q9H0R5 595 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 TAF1DQ9H5J8 278 aaPredicted RBP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 AATFQ9NY61 560 aaKnown RBP eCLIP23.86■■□□□ 1.41
SH3D21-202ENST00000474766 SERTAD1Q9UHV2 236 aa23.86■■□□□ 1.41
SH3D21-202ENST00000474766 TRIM66O15016 1216 aa23.85■■□□□ 1.41
SH3D21-202ENST00000474766 ACTN4O43707 911 aaKnown RBP23.85■■□□□ 1.41
SH3D21-202ENST00000474766 KANK3Q6NY19 840 aa23.85■■□□□ 1.41
SH3D21-202ENST00000474766 GMLQ99445 158 aa23.85■■□□□ 1.41
SH3D21-202ENST00000474766 ANKZF1Q9H8Y5 726 aa23.85■■□□□ 1.41
SH3D21-202ENST00000474766 MAN1B1Q9UKM7 699 aa23.85■■□□□ 1.41
SH3D21-202ENST00000474766 PDE4BQ07343 736 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 NPY5RQ15761 445 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 PDILTQ8N807 584 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 MLKLQ8NB16 471 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 SPATA20Q8TB22 786 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 TNFRSF25Q93038 417 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 CSRNP2Q9H175 543 aa23.84■■□□□ 1.41
SH3D21-202ENST00000474766 ARPP21Q9UBL0 812 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms