RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 USP6NLQ92738 828 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 AGBL1Q96MI9 1066 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
USF1-205ENST00000473969 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 HOMER2Q9NSB8 354 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
USF1-205ENST00000473969 RLFQ13129 1914 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 WDR19Q8NEZ3 1342 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 DDAH1O94760 285 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 INHAP05111 366 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 ICAM1P05362 532 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 CALM1P0DP23 149 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 CALM2P0DP24 149 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 CALM3P0DP25 149 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 KCNB2Q92953 911 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 LRRC2Q9BYS8 371 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
USF1-205ENST00000473969 HOXC6P09630 235 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 GRM4Q14833 912 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 ADGRF4Q8IZF3 695 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 RNF208Q9H0X6 261 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 SENP2Q9HC62 589 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 A0A0G2JMZ2 1700 aa16.01■□□□□ 0.15
USF1-205ENST00000473969 ZNF536O15090 1300 aa16■□□□□ 0.15
USF1-205ENST00000473969 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
USF1-205ENST00000473969 CCL5P13501 91 aa16■□□□□ 0.15
USF1-205ENST00000473969 CASTP20810 708 aaKnown RBP16■□□□□ 0.15
USF1-205ENST00000473969 GNAQP50148 359 aa16■□□□□ 0.15
USF1-205ENST00000473969 SOX10P56693 466 aa16■□□□□ 0.15
USF1-205ENST00000473969 TROAPQ12815 778 aa16■□□□□ 0.15
USF1-205ENST00000473969 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
USF1-205ENST00000473969 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
USF1-205ENST00000473969 TRIB2Q92519 343 aa16■□□□□ 0.15
USF1-205ENST00000473969 CPVLQ9H3G5 476 aa16■□□□□ 0.15
USF1-205ENST00000473969 HMX1Q9NP08 348 aaPredicted RBP16■□□□□ 0.15
USF1-205ENST00000473969 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
USF1-205ENST00000473969 NAP1L2Q9ULW6 460 aaPredicted RBP16■□□□□ 0.15
USF1-205ENST00000473969 PARP14Q460N5 1801 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 COBLO75128 1261 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 PGK2P07205 417 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 EXOSC10Q01780 885 aaKnown RBP15.99■□□□□ 0.15
USF1-205ENST00000473969 TRAF1Q13077 416 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 CCL14Q16627 93 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 LZTS2Q9BRK4 669 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 MYL10Q9BUA6 226 aa15.99■□□□□ 0.15
USF1-205ENST00000473969 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
USF1-205ENST00000473969 PFASO15067 1338 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 RPTORQ8N122 1335 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
USF1-205ENST00000473969 MTFR1Q15390 333 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 USH1GQ495M9 461 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 OLFML2BQ68BL8 750 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 NSMFQ6X4W1 530 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 FBXO11Q86XK2 927 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 JMJD4Q9H9V9 463 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 CYP46A1Q9Y6A2 500 aa15.98■□□□□ 0.15
USF1-205ENST00000473969 COL11A1P12107 1806 aaPredicted RBP15.97■□□□□ 0.15
USF1-205ENST00000473969 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 QRICH1Q2TAL8 776 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 Q6ZUG5 572 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
USF1-205ENST00000473969 MICU3Q86XE3 530 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 HOMER1Q86YM7 354 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 MAML3Q96JK9 1138 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 UNC93B1Q9H1C4 597 aa15.97■□□□□ 0.15
USF1-205ENST00000473969 ABCB11O95342 1321 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 DOCK3Q8IZD9 2030 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 KLF18A0A0U1RQI7 1052 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 ZBTB43O43298 467 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 GJB1P08034 283 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 CPA1P15085 419 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 CAPN2P17655 700 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 CNGA1P29973 690 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
USF1-205ENST00000473969 TRIM32Q13049 653 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 FANCBQ8NB91 859 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
USF1-205ENST00000473969 TM6SF1Q9BZW5 370 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms