RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 COA7Q96BR5 231 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 AGBL1Q96MI9 1066 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 UBA5Q9GZZ9 404 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 ZNF236Q9UL36 1845 aa15.36■□□□□ 0.05
TPM3-216ENST00000473036 CUL9Q8IWT3 2517 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 REC8O95072 547 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 MCM5P33992 734 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 TRIM32Q13049 653 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 WTAPQ15007 396 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 SYDE2Q5VT97 1194 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 RNF20Q5VTR2 975 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 FAM160B2Q86V87 743 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 NCAPG2Q86XI2 1143 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 SHCBP1Q8NEM2 672 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 CHURC1Q8WUH1 139 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 RANBP17Q9H2T7 1088 aaKnown RBP15.35■□□□□ 0.05
TPM3-216ENST00000473036 FLRT1Q9NZU1 646 aa15.35■□□□□ 0.05
TPM3-216ENST00000473036 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
TPM3-216ENST00000473036 PALM3A6NDB9 673 aaPredicted RBP15.34■□□□□ 0.05
TPM3-216ENST00000473036 DLL1O00548 723 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 COBLO75128 1261 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 IGHA2P01877 340 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
TPM3-216ENST00000473036 INHAP05111 366 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 CYP2B6P20813 491 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
TPM3-216ENST00000473036 CCNA1P78396 465 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 CCL14Q16627 93 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 WDR78Q5VTH9 848 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
TPM3-216ENST00000473036 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 MYL10Q9BUA6 226 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 LCTP09848 1927 aa15.34■□□□□ 0.05
TPM3-216ENST00000473036 PLXNA1Q9UIW2 1896 aa15.33■□□□□ 0.05
TPM3-216ENST00000473036 EPB41L2O43491 1005 aaKnown RBP15.33■□□□□ 0.04
TPM3-216ENST00000473036 ZBED4O75132 1171 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 IKQ13123 557 aaPredicted RBP15.33■□□□□ 0.04
TPM3-216ENST00000473036 GRM4Q14833 912 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 DHX32Q7L7V1 743 aaKnown RBP15.33■□□□□ 0.04
TPM3-216ENST00000473036 NECAB2Q7Z6G3 386 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 TRIB2Q92519 343 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 JAKMIP1Q96N16 626 aaKnown RBP15.33■□□□□ 0.04
TPM3-216ENST00000473036 MTA3Q9BTC8 594 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 MROH8Q9H579 483 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 MYH6P13533 1939 aa15.33■□□□□ 0.04
TPM3-216ENST00000473036 SLC15A5A6NIM6 579 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 CYTH3O43739 400 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 SLC25A27O95847 323 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 PARP1P09874 1014 aaKnown RBP15.32■□□□□ 0.04
TPM3-216ENST00000473036 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
TPM3-216ENST00000473036 RXRAP19793 462 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 ADORA2AP29274 412 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 LIFRP42702 1097 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 OAZ1P54368 228 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 MAP2K5Q13163 448 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
TPM3-216ENST00000473036 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 ZNF654Q8IZM8 581 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 DEFB118Q96PH6 123 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 NUDT12Q9BQG2 462 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 JMJD4Q9H9V9 463 aa15.32■□□□□ 0.04
TPM3-216ENST00000473036 PGK2P07205 417 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 HOXC6P09630 235 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 MUM1L1Q5H9M0 696 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 SOCS4Q8WXH5 440 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 MTMR8Q96EF0 704 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 FGD4Q96M96 766 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 GDF15Q99988 308 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 WDR19Q8NEZ3 1342 aa15.31■□□□□ 0.04
TPM3-216ENST00000473036 ERICH2A1L162 156 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 KLRF2D3W0D1 207 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
TPM3-216ENST00000473036 ICAM1P05362 532 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 FDX1P10109 184 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
TPM3-216ENST00000473036 RPS6KB1P23443 525 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 RGS2P41220 211 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 KRT32Q14532 448 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 SART3Q15020 963 aaKnown RBP15.3■□□□□ 0.04
TPM3-216ENST00000473036 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.3■□□□□ 0.04
TPM3-216ENST00000473036 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
TPM3-216ENST00000473036 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
TPM3-216ENST00000473036 MCM3APO60318 1980 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms