RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MYL10Q9BUA6 226 aa23.06■■□□□ 1.28
HDAC7-220ENST00000471235 MAD2L2Q9UI95 211 aa23.06■■□□□ 1.28
HDAC7-220ENST00000471235 LRRC37A2A6NM11 1700 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 PALM3A6NDB9 673 aaPredicted RBP23.05■■□□□ 1.28
HDAC7-220ENST00000471235 SEC24BO95487 1268 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 ELNP15502 786 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 TAL1P17542 331 aaPredicted RBP23.05■■□□□ 1.28
HDAC7-220ENST00000471235 CYP2B6P20813 491 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 SLC4A3P48751 1232 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 BLOC1S2Q6QNY1 142 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 CENPFP49454 3210 aa23.05■■□□□ 1.28
HDAC7-220ENST00000471235 CCDC69A6NI79 296 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 STRNO43815 780 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 ADORA2AP29274 412 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 SGMS1Q86VZ5 419 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 ABRAQ8N0Z2 381 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 TMTC2Q8N394 836 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 PXYLP1Q8TE99 480 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 MMP19Q99542 508 aa23.04■■□□□ 1.28
HDAC7-220ENST00000471235 KLRF2D3W0D1 207 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 EIF5BO60841 1220 aaKnown RBP23.03■■□□□ 1.28
HDAC7-220ENST00000471235 ICAM1P05362 532 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 FCER1AP12319 257 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 XRCC5P13010 732 aaKnown RBP23.03■■□□□ 1.28
HDAC7-220ENST00000471235 CASTP20810 708 aaKnown RBP23.03■■□□□ 1.28
HDAC7-220ENST00000471235 RPS6KB1P23443 525 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.03■■□□□ 1.28
HDAC7-220ENST00000471235 ADGRF4Q8IZF3 695 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 NUP133Q8WUM0 1156 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 TRIB2Q92519 343 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 ZNF333Q96JL9 665 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 HOMER2Q9NSB8 354 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 RNF146Q9NTX7 359 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 CCPG1Q9ULG6 757 aa23.03■■□□□ 1.28
HDAC7-220ENST00000471235 PSMA5P28066 241 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 CDC37Q16543 378 aaPredicted RBP23.02■■□□□ 1.28
HDAC7-220ENST00000471235 SLC35G1Q2M3R5 365 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 TKFCQ3LXA3 575 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 CHST13Q8NET6 341 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 NPLOC4Q8TAT6 608 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 MAP3K14Q99558 947 aa23.02■■□□□ 1.28
HDAC7-220ENST00000471235 INHAP05111 366 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 HOXC6P09630 235 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 ALAS1P13196 640 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 RXRAP19793 462 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 KCTD2Q14681 263 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 CCL14Q16627 93 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 NBPF11Q86T75 865 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 RAB11FIP4Q86YS3 637 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 ACAD9Q9H845 621 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 JMJD4Q9H9V9 463 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 FBXO40Q9UH90 709 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 SLC12A7Q9Y666 1083 aa23.01■■□□□ 1.27
HDAC7-220ENST00000471235 KIAA0100Q14667 2235 aaKnown RBP23■■□□□ 1.27
HDAC7-220ENST00000471235 CCDC85CA6NKD9 419 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 DHX16O60231 1041 aaKnown RBP23■■□□□ 1.27
HDAC7-220ENST00000471235 COBLO75128 1261 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 HMGCRP04035 888 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 APOA5Q6Q788 366 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 Q6ZUG5 572 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 CTCFLQ8NI51 663 aaPredicted RBP23■■□□□ 1.27
HDAC7-220ENST00000471235 TM6SF1Q9BZW5 370 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 ZSWIM6Q9HCJ5 1215 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 BRPF3Q9ULD4 1205 aa23■■□□□ 1.27
HDAC7-220ENST00000471235 PGK2P07205 417 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 CALM1P0DP23 149 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 CALM2P0DP24 149 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 CALM3P0DP25 149 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 QRICH1Q2TAL8 776 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 MUM1L1Q5H9M0 696 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 DPP9Q86TI2 863 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 MICU3Q86XE3 530 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 CCDC144CPQ8IYA2 1237 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 TRMT44Q8IYL2 757 aaKnown RBP22.99■■□□□ 1.27
HDAC7-220ENST00000471235 TRERF1Q96PN7 1200 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 VAT1LQ9HCJ6 419 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 FLRT1Q9NZU1 646 aa22.99■■□□□ 1.27
HDAC7-220ENST00000471235 BIN2Q9UBW5 565 aaPredicted RBP22.99■■□□□ 1.27
HDAC7-220ENST00000471235 CYTH3O43739 400 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 KIF5BP33176 963 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 ANAPC15P60006 121 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 FGD1P98174 961 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 TRIM32Q13049 653 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 RUFY3Q7L099 469 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 MTMR8Q96EF0 704 aa22.98■■□□□ 1.27
HDAC7-220ENST00000471235 DNAJC25-GNG10A0A024R161 153 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 KLF18A0A0U1RQI7 1052 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 PLEKHA8P1O95397 391 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 MYCP01106 439 aaPredicted RBP22.97■■□□□ 1.27
HDAC7-220ENST00000471235 UBXN2AP68543 259 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 MTFR1Q15390 333 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 FBXL16Q8N461 479 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 BRF1Q92994 677 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 AGXT2Q9BYV1 514 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 UPF3BQ9BZI7 483 aaKnown RBP22.97■■□□□ 1.27
HDAC7-220ENST00000471235 RIOX1Q9H6W3 641 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 A1CFQ9NQ94 594 aaKnown RBP22.97■■□□□ 1.27
HDAC7-220ENST00000471235 PNMA2Q9UL42 364 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 CYP46A1Q9Y6A2 500 aa22.97■■□□□ 1.27
HDAC7-220ENST00000471235 APOBRQ0VD83 1088 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms