RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GPS2Q13227 327 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 LAPTM5Q13571 262 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 TOMM20Q15388 145 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 TEAD4Q15561 434 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 SHROOM1Q2M3G4 852 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 SKOR2Q2VWA4 1001 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 INO80DQ53TQ3 878 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 FAM26DQ5JW98 314 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 WDR45BQ5MNZ6 344 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 SYCP2LQ5T4T6 812 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 KAZNQ674X7 775 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF746Q6NUN9 644 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 FAM117BQ6P1L5 589 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 C16orf54Q6UWD8 224 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 DBX2Q6ZNG2 339 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 HDGFL2Q7Z4V5 671 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 JAZF1Q86VZ6 243 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 RNF168Q8IYW5 571 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 MSANTD4Q8NCY6 345 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 TRIM58Q8NG06 486 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 CTCFLQ8NI51 663 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 L3MBTL2Q969R5 705 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 CLIP3Q96DZ5 547 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 ASB16Q96NS5 453 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 INSM2Q96T92 566 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 NACAP1Q9BZK3 213 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 FAM107BQ9H098 131 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 DNAJC25Q9H1X3 360 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 CNNM2Q9H8M5 875 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 CFDP1Q9UEE9 299 aaPredicted RBP5.77□□□□□ -1.49
COL3A1-205ENST00000470167 STK39Q9UEW8 545 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 TRAF3IP3Q9Y228 551 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 CARD8Q9Y2G2 431 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 HCN4Q9Y3Q4 1203 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 GMEB1Q9Y692 573 aa5.77□□□□□ -1.49
COL3A1-205ENST00000470167 SPDYE3A6NKU9 549 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRRT4C9JH25 899 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 KIF2AO00139 706 aaPredicted RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 MUSKO15146 869 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 ATP8B1O43520 1251 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 DIAPH2O60879 1101 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 STAMBPO95630 424 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 GZMAP12544 262 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 RAC2P15153 192 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 ENDOUP21128 410 aaKnown RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 GPTP24298 496 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 EIF1AXP47813 144 aaKnown RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 CLCN2P51788 898 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 HIRAP54198 1017 aaPredicted RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 INHBCP55103 352 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRR20EP86478 221 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRR20CP86479 221 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRR20DP86480 221 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRR20BP86481 221 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PRR20AP86496 221 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 IKQ13123 557 aaPredicted RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 SNX1Q13596 522 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PROSER3Q2NL68 480 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 TRIM71Q2Q1W2 868 aaKnown RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 CREB3L3Q68CJ9 461 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 NAA16Q6N069 864 aaPredicted RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 TMEM214Q6NUQ4 689 aaKnown RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PLBD1Q6P4A8 553 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 CARNMT1Q8N4J0 409 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 OR8K1Q8NGG5 319 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 KIAA1524Q8TCG1 905 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 RHBDD1Q8TEB9 315 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 LZICQ8WZA0 190 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PGBD4Q96DM1 585 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 SAAL1Q96ER3 474 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 CFAP36Q96G28 342 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 MYO19Q96H55 970 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 OSBPL9Q96SU4 736 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 RUFY1Q96T51 708 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 CENPOQ9BU64 300 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 BATF3Q9NR55 127 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 PDRG1Q9NUG6 133 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 TUBGCP4Q9UGJ1 667 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 FBXO2Q9UK22 296 aaPredicted RBP5.76□□□□□ -1.49
COL3A1-205ENST00000470167 C2CD2Q9Y426 696 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
COL3A1-205ENST00000470167 SMG6Q86US8 1419 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 A0A087WUV0 522 aaPredicted RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 TTC34A8MYJ7 566 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 EIF3CLB5ME19 914 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 KIF3BO15066 747 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 FIBPO43427 364 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 MGEA5O60502 916 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 MCM3P25205 808 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 HSPA1LP34931 641 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 GCKP35557 465 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CAP2P40123 477 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 TXLNAP40222 546 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 SKIV2L2P42285 1042 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 NCBP1Q09161 790 aaKnown RBP5.75□□□□□ -1.49
COL3A1-205ENST00000470167 DGKZQ13574 1117 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 CUL4BQ13620 913 aa5.75□□□□□ -1.49
COL3A1-205ENST00000470167 SMC1AQ14683 1233 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms