RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
SRRT-208ENST00000469602 IGHA2P01877 340 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 ICAM1P05362 532 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 PGK2P07205 417 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 SNAP25P60880 206 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 CACNB2Q08289 660 aaPredicted RBP11.39□□□□□ -0.59
SRRT-208ENST00000469602 ASPRV1Q53RT3 343 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 MFSD14CQ5VZR4 134 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
SRRT-208ENST00000469602 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 U2AF1L4Q8WU68 220 aaKnown RBP11.39□□□□□ -0.59
SRRT-208ENST00000469602 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 FBXO40Q9UH90 709 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 MCM3APO60318 1980 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 DNAH12Q6ZR08 3092 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 SGPL1O95470 568 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
SRRT-208ENST00000469602 MCM5P33992 734 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 ANTXR2P58335 489 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 WTAPQ15007 396 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 DDX11Q96FC9 970 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 MAML3Q96JK9 1138 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 ACAD9Q9H845 621 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
SRRT-208ENST00000469602 DIS3Q9Y2L1 958 aaKnown RBP11.38□□□□□ -0.59
SRRT-208ENST00000469602 BAZ2BQ9UIF8 2168 aaKnown RBP11.37□□□□□ -0.59
SRRT-208ENST00000469602 DNAJC25-GNG10A0A024R161 153 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 ALAS1P13196 640 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 CAPN2P17655 700 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 CCND3P30281 292 aaPredicted RBP11.37□□□□□ -0.59
SRRT-208ENST00000469602 CYP2C19P33261 490 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 ZNF792Q3KQV3 632 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 LCTP09848 1927 aa11.37□□□□□ -0.59
SRRT-208ENST00000469602 PRC1O43663 620 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 REC8O95072 547 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
SRRT-208ENST00000469602 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
SRRT-208ENST00000469602 TSGA10IPQ3SY00 556 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 TMEM87BQ96K49 555 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 TINF2Q9BSI4 451 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 CPVLQ9H3G5 476 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
SRRT-208ENST00000469602 A1CFQ9NQ94 594 aaKnown RBP11.36□□□□□ -0.59
SRRT-208ENST00000469602 PFASO15067 1338 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
SRRT-208ENST00000469602 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 CYBAP13498 195 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
SRRT-208ENST00000469602 TROAPQ12815 778 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 KRT32Q14532 448 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 GRM4Q14833 912 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
SRRT-208ENST00000469602 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
SRRT-208ENST00000469602 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 STAG2Q8N3U4 1231 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 MSL3Q8N5Y2 521 aaKnown RBP11.35□□□□□ -0.59
SRRT-208ENST00000469602 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
SRRT-208ENST00000469602 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 SH2B2O14492 632 aaPredicted RBP11.34□□□□□ -0.59
SRRT-208ENST00000469602 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
SRRT-208ENST00000469602 MSCO60682 206 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
SRRT-208ENST00000469602 CNGA1P29973 690 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 HSPA4P34932 840 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 LIFRP42702 1097 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 LHX8Q68G74 356 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 MAMDC4Q6UXC1 1216 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 UBE2Q1Q7Z7E8 422 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 FAM133AQ8N9E0 248 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 KCNB2Q92953 911 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 FGD4Q96M96 766 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 NEK1Q96PY6 1258 aa11.34□□□□□ -0.59
SRRT-208ENST00000469602 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
SRRT-208ENST00000469602 CYP39A1Q9NYL5 469 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms