RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 ZNF131P52739 623 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 SF3B2Q13435 895 aaKnown RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 SNCBQ16143 134 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 DENND2CQ68D51 928 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 BIN2Q9UBW5 565 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 TRIM49BA6NDI0 452 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 EPHB4P54760 987 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 FBXW10Q5XX13 1052 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 BLIDQ8IZY5 108 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 PAGE5Q96GU1 130 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 SH3TC1Q8TE82 1336 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 EIF4A3P38919 411 aaKnown RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 TCIRG1Q13488 830 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 ZKSCAN8Q15776 578 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 TEX11Q8IYF3 940 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 GREM2Q9H772 168 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 PKD2L1Q9P0L9 805 aa11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
TRAPPC10-207ENST00000468864 BACH1O14867 736 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 GYG1P46976 350 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SEL1L2Q5TEA6 688 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 ATP8A1Q9Y2Q0 1164 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 ATP10DQ9P241 1426 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CYP2D7A0A087X1C5 515 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CHMP2AO43633 222 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CTNND1O60716 968 aaKnown RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 FLOT1O75955 427 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 IFNAR1P17181 557 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 NR1D1P20393 614 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 ALDH3A1P30838 453 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SLCO1A2P46721 670 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SESN3P58005 492 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 TNIP1Q15025 636 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CCDC63Q8NA47 563 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SLC24A3Q9HC58 644 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SH2B2O14492 632 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 PDE8AO60658 829 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 SCG2P13521 617 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 PTPREP23469 700 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 PPP1R2P41236 205 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 RESP18Q5W5W9 173 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CAPN12Q6ZSI9 719 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 CHP1Q99653 195 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 TSKSQ9UJT2 592 aa11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
TRAPPC10-207ENST00000468864 EIF4E1BA6NMX2 242 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 IL2RBP14784 551 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 RPL13P26373 211 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 CALCRLQ16602 461 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 VWA3BQ502W6 1294 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 FAM133BQ5BKY9 247 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SRPRBQ9Y5M8 271 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SMCO2A6NFE2 343 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 TBC1D8O95759 1140 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 CDC27P30260 824 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 LMNTD2Q8IXW0 634 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SH2D3CQ8N5H7 860 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 NOA1Q8NC60 698 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 BICD1Q96G01 975 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 ABHD10Q9NUJ1 306 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 TBX22Q9Y458 520 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 NEDD9Q14511 834 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 LRCH2Q5VUJ6 765 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 STMN2Q93045 179 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 MTMR3Q13615 1198 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 CUL4BQ13620 913 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 FMNL3Q8IVF7 1028 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 SMC6Q96SB8 1091 aa11.67□□□□□ -0.54
TRAPPC10-207ENST00000468864 MED14O60244 1454 aa11.66□□□□□ -0.54
TRAPPC10-207ENST00000468864 STX2P32856 288 aa11.66□□□□□ -0.54
TRAPPC10-207ENST00000468864 MAPKAPK5Q8IW41 473 aa11.66□□□□□ -0.54
TRAPPC10-207ENST00000468864 CEP63Q96MT8 703 aa11.66□□□□□ -0.54
TRAPPC10-207ENST00000468864 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC10-207ENST00000468864 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms