RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 FCER1AP12319 257 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 CPA1P15085 419 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 CNGA1P29973 690 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 MAGEA10P43363 369 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-208ENST00000468459 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 PRAMEF19Q5SWL8 479 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-208ENST00000468459 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 UBAC1Q9BSL1 405 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 SENP2Q9HC62 589 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 SLC5A4Q9NY91 659 aa17.29■□□□□ 0.36
COL16A1-208ENST00000468459 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 PRC1O43663 620 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
COL16A1-208ENST00000468459 SEC23AQ15436 765 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 ZNF792Q3KQV3 632 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
COL16A1-208ENST00000468459 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-208ENST00000468459 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
COL16A1-208ENST00000468459 DIS3Q9Y2L1 958 aaKnown RBP17.28■□□□□ 0.36
COL16A1-208ENST00000468459 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
COL16A1-208ENST00000468459 EPB41L2O43491 1005 aaKnown RBP17.27■□□□□ 0.36
COL16A1-208ENST00000468459 PGK2P07205 417 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 NT5C2P49902 561 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 PPP4R3BQ5MIZ7 849 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 SLFN13Q68D06 897 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 LRCH3Q96II8 777 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 NEK1Q96PY6 1258 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 MMP19Q99542 508 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 NRBP1Q9UHY1 535 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
COL16A1-208ENST00000468459 ATP2A1O14983 1001 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 MCCP23508 829 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 COPB2P35606 906 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 KRT32Q14532 448 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 TMEM67Q5HYA8 995 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 GJC2Q5T442 439 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-208ENST00000468459 ANO1Q5XXA6 986 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 PRPF38AQ8NAV1 312 aaKnown RBP17.26■□□□□ 0.35
COL16A1-208ENST00000468459 TINF2Q9BSI4 451 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 TEX13BQ9BXU2 312 aa17.26■□□□□ 0.35
COL16A1-208ENST00000468459 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
COL16A1-208ENST00000468459 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-208ENST00000468459 MCM5P33992 734 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 KCTD2Q14681 263 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
COL16A1-208ENST00000468459 ARRDC4Q8NCT1 418 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 IGDCC4Q8TDY8 1250 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 ANKS1AQ92625 1134 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 TTC14Q96N46 770 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
COL16A1-208ENST00000468459 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 DNAJC25-GNG10A0A024R161 153 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-208ENST00000468459 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-208ENST00000468459 WTAPQ15007 396 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 SNX17Q15036 470 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL16A1-208ENST00000468459 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
COL16A1-208ENST00000468459 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 PDHBP11177 359 aa17.23■□□□□ 0.35
COL16A1-208ENST00000468459 BMP3P12645 472 aa17.23■□□□□ 0.35
COL16A1-208ENST00000468459 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 SLC1A4P43007 532 aa17.23■□□□□ 0.35
COL16A1-208ENST00000468459 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 LRRC41Q15345 812 aa17.23■□□□□ 0.35
COL16A1-208ENST00000468459 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
COL16A1-208ENST00000468459 COL6A3P12111 3177 aa17.23■□□□□ 0.35
COL16A1-208ENST00000468459 ERICH2A1L162 156 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 RPS6KB1P23443 525 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 RTP1P59025 263 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 GPR153Q6NV75 609 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
COL16A1-208ENST00000468459 MSL3Q8N5Y2 521 aaKnown RBP17.22■□□□□ 0.35
COL16A1-208ENST00000468459 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 MYL10Q9BUA6 226 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 UPF3BQ9BZI7 483 aaKnown RBP17.22■□□□□ 0.35
COL16A1-208ENST00000468459 UBE2OQ9C0C9 1292 aaKnown RBP17.22■□□□□ 0.35
COL16A1-208ENST00000468459 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
COL16A1-208ENST00000468459 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms