RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 GPATCH4Q5T3I0 446 aaKnown RBP20.29■□□□□ 0.84
CLDN11-202ENST00000468358 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 CHST13Q8NET6 341 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 ANKS1AQ92625 1134 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 SHISA4Q96DD7 197 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 RNF146Q9NTX7 359 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 CCPG1Q9ULG6 757 aa20.29■□□□□ 0.84
CLDN11-202ENST00000468358 DHX16O60231 1041 aaKnown RBP20.28■□□□□ 0.84
CLDN11-202ENST00000468358 SNHG28P0DPA3 235 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 CCND3P30281 292 aaPredicted RBP20.28■□□□□ 0.84
CLDN11-202ENST00000468358 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 RNF20Q5VTR2 975 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 BTNL9Q6UXG8 535 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 MAML3Q96JK9 1138 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 ACAD9Q9H845 621 aa20.28■□□□□ 0.84
CLDN11-202ENST00000468358 ZNF536O15090 1300 aa20.27■□□□□ 0.84
CLDN11-202ENST00000468358 PARP1P09874 1014 aaKnown RBP20.27■□□□□ 0.84
CLDN11-202ENST00000468358 WTAPQ15007 396 aa20.27■□□□□ 0.84
CLDN11-202ENST00000468358 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
CLDN11-202ENST00000468358 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
CLDN11-202ENST00000468358 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.84
CLDN11-202ENST00000468358 RANBP17Q9H2T7 1088 aaKnown RBP20.27■□□□□ 0.84
CLDN11-202ENST00000468358 SEC23AQ15436 765 aa20.26■□□□□ 0.83
CLDN11-202ENST00000468358 TKFCQ3LXA3 575 aa20.26■□□□□ 0.83
CLDN11-202ENST00000468358 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
CLDN11-202ENST00000468358 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
CLDN11-202ENST00000468358 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
CLDN11-202ENST00000468358 PDE4DIPQ5VU43 2346 aa20.25■□□□□ 0.83
CLDN11-202ENST00000468358 FARP2O94887 1054 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-202ENST00000468358 ICAM1P05362 532 aa20.25■□□□□ 0.83
CLDN11-202ENST00000468358 TAL1P17542 331 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-202ENST00000468358 NECTIN1Q15223 517 aa20.25■□□□□ 0.83
CLDN11-202ENST00000468358 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-202ENST00000468358 PRC1O43663 620 aa20.24■□□□□ 0.83
CLDN11-202ENST00000468358 MCM5P33992 734 aa20.24■□□□□ 0.83
CLDN11-202ENST00000468358 ANTXR2P58335 489 aa20.24■□□□□ 0.83
CLDN11-202ENST00000468358 ZNF792Q3KQV3 632 aa20.24■□□□□ 0.83
CLDN11-202ENST00000468358 DIS3Q9Y2L1 958 aaKnown RBP20.24■□□□□ 0.83
CLDN11-202ENST00000468358 BRCA2P51587 3418 aa20.24■□□□□ 0.83
CLDN11-202ENST00000468358 MYH6P13533 1939 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 POTEB2H3BUK9 544 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 NSMFQ6X4W1 530 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 TINF2Q9BSI4 451 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 CRISPLD2Q9H0B8 497 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
CLDN11-202ENST00000468358 SMCHD1A6NHR9 2005 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 CYBAP13498 195 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 CAPN2P17655 700 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 USH1GQ495M9 461 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 PRAMEF19Q5SWL8 479 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 NFXL1Q6ZNB6 911 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 CATIPQ7Z7H3 387 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 SENP2Q9HC62 589 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 A1CFQ9NQ94 594 aaKnown RBP20.22■□□□□ 0.83
CLDN11-202ENST00000468358 PNMA2Q9UL42 364 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 PFASO15067 1338 aa20.22■□□□□ 0.83
CLDN11-202ENST00000468358 FRMPD3Q5JV73 1810 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 DNAJC25-GNG10A0A024R161 153 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 CDC37Q16543 378 aaPredicted RBP20.21■□□□□ 0.83
CLDN11-202ENST00000468358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLDN11-202ENST00000468358 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 TRPV1Q8NER1 839 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 NUP133Q8WUM0 1156 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 DDX20Q9UHI6 824 aaKnown RBP20.21■□□□□ 0.83
CLDN11-202ENST00000468358 CNPY2Q9Y2B0 182 aa20.21■□□□□ 0.83
CLDN11-202ENST00000468358 CCDC69A6NI79 296 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 MSCO60682 206 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 REC8O95072 547 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 CNTN2Q02246 1040 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 ANO1Q5XXA6 986 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 IGDCC4Q8TDY8 1250 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 OGDHLQ9ULD0 1010 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 WDR19Q8NEZ3 1342 aa20.2■□□□□ 0.82
CLDN11-202ENST00000468358 MCM3APO60318 1980 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 PTPDC1A2A3K4 754 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
CLDN11-202ENST00000468358 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
CLDN11-202ENST00000468358 GRM4Q14833 912 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 LHX8Q68G74 356 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 PAWRQ96IZ0 340 aaKnown RBP20.19■□□□□ 0.82
CLDN11-202ENST00000468358 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 LY9Q9HBG7 655 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
CLDN11-202ENST00000468358 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
CLDN11-202ENST00000468358 NFIBO00712 420 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 SEPT4O43236 478 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 IGHA2P01877 340 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 KRT32Q14532 448 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 NECAB2Q7Z6G3 386 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
CLDN11-202ENST00000468358 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
CLDN11-202ENST00000468358 MSL3Q8N5Y2 521 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms