RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TGFBRAP1Q8WUH2 860 aa14.39□□□□□ -0.11
VPS26A-204ENST00000467852 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
VPS26A-204ENST00000467852 TGS1Q96RS0 853 aaKnown RBP14.39□□□□□ -0.11
VPS26A-204ENST00000467852 PALD1Q9ULE6 856 aa14.39□□□□□ -0.11
VPS26A-204ENST00000467852 ACACBO00763 2458 aa14.39□□□□□ -0.11
VPS26A-204ENST00000467852 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 BAG3O95817 575 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 PLCG2P16885 1265 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 AVPR2P30518 371 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 RFC2P35250 354 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 KCNJ6P48051 423 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 ERVK-21P61565 698 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 RALBP1Q15311 655 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 PABPC5Q96DU9 382 aaKnown RBP14.38□□□□□ -0.11
VPS26A-204ENST00000467852 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS26A-204ENST00000467852 CABP5Q9NP86 173 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 SIP14410 1827 aa14.38□□□□□ -0.11
VPS26A-204ENST00000467852 DMDP11532 3685 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 LCHNA4D1U4 455 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 SNAI1O95863 264 aaPredicted RBP14.37□□□□□ -0.11
VPS26A-204ENST00000467852 NBL1P41271 181 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 PTPROQ16827 1216 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 CXCL17Q6UXB2 119 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 ADSSL1Q8N142 457 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 RAI14Q9P0K7 980 aa14.37□□□□□ -0.11
VPS26A-204ENST00000467852 COL11A1P12107 1806 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-204ENST00000467852 ZFHX4Q86UP3 3567 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 KDM4AO75164 1064 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 SUPT20HL2P0C7V6 817 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
VPS26A-204ENST00000467852 ZXDAP98168 799 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 SMAD2Q15796 467 aaKnown RBP14.36□□□□□ -0.11
VPS26A-204ENST00000467852 ABCB5Q2M3G0 1257 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
VPS26A-204ENST00000467852 NKD2Q969F2 451 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-204ENST00000467852 VPS13AQ96RL7 3174 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 CHD6Q8TD26 2715 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 A0A1B0GUL7 405 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 FLOT1O75955 427 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 BEX3Q00994 111 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 CCDC144BQ3MJ40 725 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
VPS26A-204ENST00000467852 TIGD5Q53EQ6 642 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 TATDN1Q6P1N9 297 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 MRPL38Q96DV4 380 aaKnown RBP14.35□□□□□ -0.11
VPS26A-204ENST00000467852 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
VPS26A-204ENST00000467852 SAP30BPQ9UHR5 308 aaKnown RBP14.35□□□□□ -0.11
VPS26A-204ENST00000467852 FLT1P17948 1338 aa14.35□□□□□ -0.11
VPS26A-204ENST00000467852 CFAP47Q6ZTR5 3102 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 ZEB2O60315 1214 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 ADORA1P30542 326 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 COL9A2Q14055 689 aaPredicted RBP14.34□□□□□ -0.11
VPS26A-204ENST00000467852 TMEM132BQ14DG7 1078 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 RIOX2Q8IUF8 465 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 TET1Q8NFU7 2136 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 CRBNQ96SW2 442 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 CLDND1Q9NY35 253 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 PTPRSQ13332 1948 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 MCM3APO60318 1980 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 TNKSO95271 1327 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 FOCADQ5VW36 1801 aa14.34□□□□□ -0.11
VPS26A-204ENST00000467852 STXBP3O00186 592 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 CTAGE5O15320 804 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 ADCY6O43306 1168 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
VPS26A-204ENST00000467852 NCK2O43639 380 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 COPB2P35606 906 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 NKX3-2P78367 333 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 SIGLEC14Q08ET2 396 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
VPS26A-204ENST00000467852 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 RAD9AQ99638 391 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 WDR87Q6ZQQ6 2873 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 MYH1P12882 1939 aa14.33□□□□□ -0.12
VPS26A-204ENST00000467852 VAMP4O75379 141 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 CIAO1O76071 339 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 CYP2C9P11712 490 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-204ENST00000467852 RETREG2Q8NC44 543 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-204ENST00000467852 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-204ENST00000467852 DMXL1Q9Y485 3027 aa14.32□□□□□ -0.12
VPS26A-204ENST00000467852 DNAH14Q0VDD8 3507 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 LINC01553A4QN01 128 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 MBTPS2O43462 519 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 STAT3P40763 770 aa14.31□□□□□ -0.12
VPS26A-204ENST00000467852 PUM1Q14671 1186 aaKnown RBP eCLIP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms