RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PDE4DIPQ5VU43 2346 aa15.11■□□□□ 0.01
COL5A1-206ENST00000465877 RPTORQ8N122 1335 aa15.11■□□□□ 0.01
COL5A1-206ENST00000465877 ERICH2A1L162 156 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 IFIT3O14879 490 aaKnown RBP15.1■□□□□ 0.01
COL5A1-206ENST00000465877 COBLO75128 1261 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 GOLGA8HP0CJ92 632 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 TAL1P17542 331 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-206ENST00000465877 SNAP25P60880 206 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-206ENST00000465877 WTAPQ15007 396 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 ASPRV1Q53RT3 343 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 OLFML2BQ68BL8 750 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
COL5A1-206ENST00000465877 HMX1Q9NP08 348 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-206ENST00000465877 RNF146Q9NTX7 359 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 FBXO40Q9UH90 709 aa15.1■□□□□ 0.01
COL5A1-206ENST00000465877 ICAM1P05362 532 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 PGK2P07205 417 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
COL5A1-206ENST00000465877 GJA8P48165 433 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 CACNB2Q08289 660 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-206ENST00000465877 MFSD14CQ5VZR4 134 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 CHST13Q8NET6 341 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 MAML3Q96JK9 1138 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 AGBL1Q96MI9 1066 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 DEFB118Q96PH6 123 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 CPVLQ9H3G5 476 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 ACAD9Q9H845 621 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 CCPG1Q9ULG6 757 aa15.09■□□□□ 0.01
COL5A1-206ENST00000465877 PRC1O43663 620 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 IGHA2P01877 340 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 ALAS1P13196 640 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 CCND3P30281 292 aaPredicted RBP15.08■□□□□ 0
COL5A1-206ENST00000465877 CYP2C19P33261 490 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 MCM5P33992 734 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 COL9A3Q14050 684 aaPredicted RBP15.08■□□□□ 0
COL5A1-206ENST00000465877 TKFCQ3LXA3 575 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 TMEM67Q5HYA8 995 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 WDR19Q8NEZ3 1342 aa15.08■□□□□ 0
COL5A1-206ENST00000465877 BAZ2BQ9UIF8 2168 aaKnown RBP15.07■□□□□ 0
COL5A1-206ENST00000465877 DNAJC25-GNG10A0A024R161 153 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 SGPL1O95470 568 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 CYBAP13498 195 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 ZNF792Q3KQV3 632 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 ANKRD35Q8N283 1001 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 TRERF1Q96PN7 1200 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 MTA3Q9BTC8 594 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 LY9Q9HBG7 655 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
COL5A1-206ENST00000465877 DIS3Q9Y2L1 958 aaKnown RBP15.07■□□□□ 0
COL5A1-206ENST00000465877 DNAH12Q6ZR08 3092 aa15.07■□□□□ 0
COL5A1-206ENST00000465877 SH2B2O14492 632 aaPredicted RBP15.06■□□□□ 0
COL5A1-206ENST00000465877 REC8O95072 547 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 GRM4Q14833 912 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 CDC37Q16543 378 aaPredicted RBP15.06■□□□□ 0
COL5A1-206ENST00000465877 MUM1L1Q5H9M0 696 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 RASEFQ8IZ41 740 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 DDX11Q96FC9 970 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 TMEM87BQ96K49 555 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 MAD2L2Q9UI95 211 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 PFASO15067 1338 aa15.06■□□□□ 0
COL5A1-206ENST00000465877 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
COL5A1-206ENST00000465877 TROAPQ12815 778 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 ADGRF4Q8IZF3 695 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 ZNF654Q8IZM8 581 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 TRPV1Q8NER1 839 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 IGDCC4Q8TDY8 1250 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 TINF2Q9BSI4 451 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 UBA5Q9GZZ9 404 aa15.05■□□□□ -0
COL5A1-206ENST00000465877 GPHNQ9NQX3 736 aaPredicted RBP15.05■□□□□ -0
COL5A1-206ENST00000465877 KIAA1217Q5T5P2 1943 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 SYNGAP1Q96PV0 1343 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 PALM3A6NDB9 673 aaPredicted RBP15.04■□□□□ -0
COL5A1-206ENST00000465877 NFIBO00712 420 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 DDAH1O94760 285 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 FARP2O94887 1054 aaPredicted RBP15.04■□□□□ -0
COL5A1-206ENST00000465877 HSPA4P34932 840 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 KRT32Q14532 448 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 USH1GQ495M9 461 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 CATIPQ7Z7H3 387 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 ZNF467Q7Z7K2 595 aaPredicted RBP15.04■□□□□ -0
COL5A1-206ENST00000465877 FGD4Q96M96 766 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 NEK1Q96PY6 1258 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 MYL10Q9BUA6 226 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 LRRC2Q9BYS8 371 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 PNMA2Q9UL42 364 aa15.04■□□□□ -0
COL5A1-206ENST00000465877 KLRF2D3W0D1 207 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 CAPN2P17655 700 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 CNGA1P29973 690 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 QRICH1Q2TAL8 776 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 TSGA10IPQ3SY00 556 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 NSMFQ6X4W1 530 aa15.03■□□□□ -0
COL5A1-206ENST00000465877 UBE2Q1Q7Z7E8 422 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms