RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 IMMTQ16891 758 aaKnown RBP25.64■■□□□ 1.7
LIME1-203ENST00000465591 BTNL9Q6UXG8 535 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 ANKRD35Q8N283 1001 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 TTC14Q96N46 770 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 RNF146Q9NTX7 359 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 PCDH10Q9P2E7 1040 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 FBXO40Q9UH90 709 aa25.64■■□□□ 1.7
LIME1-203ENST00000465591 LCTP09848 1927 aa25.64■■□□□ 1.69
LIME1-203ENST00000465591 RAD50Q92878 1312 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 RANBP2P49792 3224 aaKnown RBP25.63■■□□□ 1.69
LIME1-203ENST00000465591 SLC34A2O95436 690 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 SNAI1O95863 264 aaPredicted RBP25.63■■□□□ 1.69
LIME1-203ENST00000465591 ZNF865P0CJ78 1059 aaPredicted RBP25.63■■□□□ 1.69
LIME1-203ENST00000465591 PTH1RQ03431 593 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 LRRC26Q2I0M4 334 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 GJC2Q5T442 439 aaPredicted RBP25.63■■□□□ 1.69
LIME1-203ENST00000465591 SKAP1Q86WV1 359 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 CTNNA3Q9UI47 895 aa25.63■■□□□ 1.69
LIME1-203ENST00000465591 SNHG28P0DPA3 235 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 ALAS1P13196 640 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 CNTN2Q02246 1040 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 MUM1L1Q5H9M0 696 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 SYDE2Q5VT97 1194 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 LENG1Q96BZ8 264 aaPredicted RBP25.62■■□□□ 1.69
LIME1-203ENST00000465591 RANBP17Q9H2T7 1088 aaKnown RBP25.62■■□□□ 1.69
LIME1-203ENST00000465591 ACAD9Q9H845 621 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 A1CFQ9NQ94 594 aaKnown RBP25.62■■□□□ 1.69
LIME1-203ENST00000465591 ZSWIM5Q9P217 1185 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 NRBP1Q9UHY1 535 aa25.62■■□□□ 1.69
LIME1-203ENST00000465591 DNM1LO00429 736 aa25.61■■□□□ 1.69
LIME1-203ENST00000465591 ZNF543Q08ER8 600 aa25.61■■□□□ 1.69
LIME1-203ENST00000465591 MAMDC4Q6UXC1 1216 aa25.61■■□□□ 1.69
LIME1-203ENST00000465591 TRERF1Q96PN7 1200 aa25.61■■□□□ 1.69
LIME1-203ENST00000465591 SENP6Q9GZR1 1112 aaPredicted RBP25.61■■□□□ 1.69
LIME1-203ENST00000465591 PRO3102Q9H379 93 aa25.61■■□□□ 1.69
LIME1-203ENST00000465591 ZMYND8Q9ULU4 1186 aaPredicted RBP25.61■■□□□ 1.69
LIME1-203ENST00000465591 ZNF467Q7Z7K2 595 aaPredicted RBP25.6■■□□□ 1.69
LIME1-203ENST00000465591 DGKHQ86XP1 1220 aa25.6■■□□□ 1.69
LIME1-203ENST00000465591 RBM27Q9P2N5 1060 aaKnown RBP25.6■■□□□ 1.69
LIME1-203ENST00000465591 SYNGAP1Q96PV0 1343 aa25.6■■□□□ 1.69
LIME1-203ENST00000465591 DNAH12Q6ZR08 3092 aa25.6■■□□□ 1.69
LIME1-203ENST00000465591 SGSM2O43147 1006 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 TKFCQ3LXA3 575 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 MSL3Q8N5Y2 521 aaKnown RBP25.59■■□□□ 1.69
LIME1-203ENST00000465591 ENAHQ8N8S7 591 aaPredicted RBP25.59■■□□□ 1.69
LIME1-203ENST00000465591 FAM133AQ8N9E0 248 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 RUFY2Q8WXA3 655 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 ANKS1AQ92625 1134 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 ZSCAN10Q96SZ4 725 aaPredicted RBP25.59■■□□□ 1.69
LIME1-203ENST00000465591 CCPG1Q9ULG6 757 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 TAF6LQ9Y6J9 622 aa25.59■■□□□ 1.69
LIME1-203ENST00000465591 MYCNP04198 464 aaPredicted RBP25.58■■□□□ 1.69
LIME1-203ENST00000465591 ICAM1P05362 532 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 GOLGA8HP0CJ92 632 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 SYN1P17600 705 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 LRRC41Q15345 812 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 IQCA1Q86XH1 822 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 ARRDC4Q8NCT1 418 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 CPVLQ9H3G5 476 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.58■■□□□ 1.69
LIME1-203ENST00000465591 CNPY2Q9Y2B0 182 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 ASTN1O14525 1302 aa25.58■■□□□ 1.69
LIME1-203ENST00000465591 SOWAHBA6NEL2 793 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 POTEB2H3BUK9 544 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 CYP21A2P08686 494 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 NT5C2P49902 561 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 ATN1P54259 1190 aaPredicted RBP25.57■■□□□ 1.68
LIME1-203ENST00000465591 CYB5R4Q7L1T6 521 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 PNMA1Q8ND90 353 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 KRT23Q9C075 422 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 DDX49Q9Y6V7 483 aaKnown RBP25.57■■□□□ 1.68
LIME1-203ENST00000465591 TNKSO95271 1327 aa25.57■■□□□ 1.68
LIME1-203ENST00000465591 PGK1P00558 417 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 RARBP10826 455 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 ARMCX2Q7L311 632 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 PURBQ96QR8 312 aaKnown RBP25.56■■□□□ 1.68
LIME1-203ENST00000465591 KATNBL1Q9H079 304 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 XPNPEP3Q9NQH7 507 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 ZHX1Q9UKY1 873 aaPredicted RBP25.56■■□□□ 1.68
LIME1-203ENST00000465591 LRRC37A2A6NM11 1700 aa25.56■■□□□ 1.68
LIME1-203ENST00000465591 ADCY6O43306 1168 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 AKR1A1P14550 325 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 CCDC178Q5BJE1 867 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 CCDC144CPQ8IYA2 1237 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 UBA5Q9GZZ9 404 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 CNNM2Q9H8M5 875 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 CYP39A1Q9NYL5 469 aa25.55■■□□□ 1.68
LIME1-203ENST00000465591 KBTBD13C9JR72 458 aa25.54■■□□□ 1.68
LIME1-203ENST00000465591 FXR1P51114 621 aaKnown RBP eCLIP25.54■■□□□ 1.68
LIME1-203ENST00000465591 ACVR2BQ13705 512 aa25.54■■□□□ 1.68
LIME1-203ENST00000465591 KAT14Q9H8E8 782 aa25.54■■□□□ 1.68
LIME1-203ENST00000465591 NFIBO00712 420 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 ADAMTS4O75173 837 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 ADCYAP1R1P41586 468 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 IRX5P78411 483 aaPredicted RBP25.53■■□□□ 1.68
LIME1-203ENST00000465591 SEC23AQ15436 765 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 NSMFQ6X4W1 530 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 STOX1Q6ZVD7 989 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 CENPQQ7L2Z9 268 aaPredicted RBP25.53■■□□□ 1.68
LIME1-203ENST00000465591 FERMT2Q96AC1 680 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms