RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 UBA5Q9GZZ9 404 aa23.03■■□□□ 1.28
COL9A3-204ENST00000463487 PDRG1Q9NUG6 133 aa23.03■■□□□ 1.28
COL9A3-204ENST00000463487 RBM28Q9NW13 759 aaKnown RBP23.03■■□□□ 1.28
COL9A3-204ENST00000463487 PTPN22Q9Y2R2 807 aa23.03■■□□□ 1.28
COL9A3-204ENST00000463487 ICAM1P05362 532 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 CTGFP29279 349 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 PPP2R5BQ15173 497 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 ANKRD1Q15327 319 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 COL13A1Q5TAT6 717 aaPredicted RBP23.02■■□□□ 1.28
COL9A3-204ENST00000463487 ADGRF4Q8IZF3 695 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 STAG2Q8N3U4 1231 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 CHST13Q8NET6 341 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 SLC5A4Q9NY91 659 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 CCPG1Q9ULG6 757 aa23.02■■□□□ 1.28
COL9A3-204ENST00000463487 CCDC196A0A1B0GTZ2 297 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 SLC15A5A6NIM6 579 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 FCER1AP12319 257 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 PRKCZQ05513 592 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 KCTD2Q14681 263 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 ABRAQ8N0Z2 381 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 FANCBQ8NB91 859 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 AGXT2Q9BYV1 514 aa23.01■■□□□ 1.27
COL9A3-204ENST00000463487 GOLGA8BA8MQT2 603 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 PTPREP23469 700 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 SMARCA1P28370 1054 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 RGS2P41220 211 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 FLT3LGP49771 235 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 IRF5Q13568 498 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 CDC37Q16543 378 aaPredicted RBP23■■□□□ 1.27
COL9A3-204ENST00000463487 MMP19Q99542 508 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 MCOLN1Q9GZU1 580 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 ZSWIM8A7E2V4 1837 aa23■■□□□ 1.27
COL9A3-204ENST00000463487 GOLGA8AA7E2F4 631 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 ALAS1P13196 640 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 APOBRQ0VD83 1088 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 RTN1Q16799 776 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 CCDC144CPQ8IYA2 1237 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 SPZ1Q9BXG8 430 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 ACAD9Q9H845 621 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 VAT1LQ9HCJ6 419 aa22.99■■□□□ 1.27
COL9A3-204ENST00000463487 RXRAP19793 462 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 RBM25P49756 843 aaKnown RBP22.98■■□□□ 1.27
COL9A3-204ENST00000463487 METAP2P50579 478 aaKnown RBP eCLIP22.98■■□□□ 1.27
COL9A3-204ENST00000463487 SNAP25P60880 206 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 CAP1Q01518 475 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 MAP2K5Q13163 448 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 GRB14Q14449 540 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 NBPF11Q86T75 865 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 TRMT44Q8IYL2 757 aaKnown RBP22.98■■□□□ 1.27
COL9A3-204ENST00000463487 TNS4Q8IZW8 715 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 SLAIN1Q8ND83 568 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 AGBL1Q96MI9 1066 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 CPVLQ9H3G5 476 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 HOMER2Q9NSB8 354 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 RNF146Q9NTX7 359 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 SEC63Q9UGP8 760 aaKnown RBP22.98■■□□□ 1.27
COL9A3-204ENST00000463487 BRPF3Q9ULD4 1205 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 ZNF536O15090 1300 aa22.98■■□□□ 1.27
COL9A3-204ENST00000463487 ZBTB5O15062 677 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 SLC9C1Q4G0N8 1177 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 DPP9Q86TI2 863 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 FBXO11Q86XK2 927 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 IL27Q8NEV9 243 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 RRP36Q96EU6 259 aaKnown RBP22.97■■□□□ 1.27
COL9A3-204ENST00000463487 DDX11Q96FC9 970 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 TRERF1Q96PN7 1200 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 APBA2Q99767 749 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 RIOX1Q9H6W3 641 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 JMJD4Q9H9V9 463 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 GJD2Q9UKL4 321 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 GABRQQ9UN88 632 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 PTCH2Q9Y6C5 1203 aa22.97■■□□□ 1.27
COL9A3-204ENST00000463487 PLXNB2O15031 1838 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 XRCC5P13010 732 aaKnown RBP22.96■■□□□ 1.27
COL9A3-204ENST00000463487 ADORA2AP29274 412 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 QRICH1Q2TAL8 776 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 MORN1Q5T089 497 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 HOMER1Q86YM7 354 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 RAB11FIP4Q86YS3 637 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 ANKRD35Q8N283 1001 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 AMNQ9BXJ7 453 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 ALDH8A1Q9H2A2 487 aaPredicted RBP22.96■■□□□ 1.27
COL9A3-204ENST00000463487 RIPK3Q9Y572 518 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 ZNF236Q9UL36 1845 aa22.96■■□□□ 1.27
COL9A3-204ENST00000463487 PFASO15067 1338 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 ADCY3O60266 1144 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 ABCB11O95342 1321 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 NEK4P51957 841 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 EVCP57679 992 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 TOB2Q14106 344 aaPredicted RBP22.95■■□□□ 1.26
COL9A3-204ENST00000463487 TMTC3Q6ZXV5 915 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.95■■□□□ 1.26
COL9A3-204ENST00000463487 PXYLP1Q8TE99 480 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 ZNF274Q96GC6 653 aaPredicted RBP22.95■■□□□ 1.26
COL9A3-204ENST00000463487 BACH2Q9BYV9 841 aa22.95■■□□□ 1.26
COL9A3-204ENST00000463487 PNMA6FA0A0J9YX94 578 aa22.94■■□□□ 1.26
COL9A3-204ENST00000463487 CYP2B6P20813 491 aa22.94■■□□□ 1.26
COL9A3-204ENST00000463487 GRK4P32298 578 aa22.94■■□□□ 1.26
COL9A3-204ENST00000463487 USH1GQ495M9 461 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms