RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	POTED	Q86YR6	584 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	PXYLP1	Q8TE99	480 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	NUP133	Q8WUM0	1156 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	TRIB2	Q92519	343 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	ANKS1A	Q92625	1134 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	RNF146	Q9NTX7	359 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	SLC5A4	Q9NY91	659 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	CCPG1	Q9ULG6	757 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	RIPK3	Q9Y572	518 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	ZNF236	Q9UL36	1845 aa		11.23	□□□□□ -0.61
PSMD4-208	ENST00000462970	POTEF	A5A3E0	1075 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	CCDC69	A6NI79	296 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	MCM3AP	O60318	1980 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	PLA2G6	O60733	806 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	COBL	O75128	1261 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	PRKAR2A	P13861	404 aa	Known RBP	11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	OAZ1	P54368	228 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	FGD1	P98174	961 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	KRT32	Q14532	448 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	ASPRV1	Q53RT3	343 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	MFSD14C	Q5VZR4	134 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	RAB11FIP4	Q86YS3	637 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	TRMT44	Q8IYL2	757 aa	Known RBP	11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	RASEF	Q8IZ41	740 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	ANKRD35	Q8N283	1001 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	NPLOC4	Q8TAT6	608 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	USP6NL	Q92738	828 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	TCEANC2	Q96MN5	208 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	JAKMIP1	Q96N16	626 aa	Known RBP	11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	NEK1	Q96PY6	1258 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	MYL10	Q9BUA6	226 aa		11.22	□□□□□ -0.61
PSMD4-208	ENST00000462970	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	KLRF2	D3W0D1	207 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	SNHG28	P0DPA3	235 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	XRCC5	P13010	732 aa	Known RBP	11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	CPA1	P15085	419 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	EN2	P19622	333 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	CNGA1	P29973	690 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	CYP2C19	P33261	490 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	COL9A3	Q14050	684 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	ADCK5	Q3MIX3	580 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	USH1G	Q495M9	461 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	BTNL9	Q6UXG8	535 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	NSMF	Q6X4W1	530 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	CCDC144CP	Q8IYA2	1237 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	ADGRF4	Q8IZF3	695 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	ABRA	Q8N0Z2	381 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	STAG2	Q8N3U4	1231 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	CHST13	Q8NET6	341 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	IGDCC4	Q8TDY8	1250 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	PIBF1	Q8WXW3	757 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	TMEM87B	Q96K49	555 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	TRERF1	Q96PN7	1200 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	ACAD9	Q9H845	621 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	LY9	Q9HBG7	655 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	FLRT1	Q9NZU1	646 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	FBXO40	Q9UH90	709 aa		11.21	□□□□□ -0.61
PSMD4-208	ENST00000462970	ZNF536	O15090	1300 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	SH2B2	O14492	632 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	ATP2A1	O14983	1001 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	TFRC	P02786	760 aa	Known RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	ICAM1	P05362	532 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	RXRA	P19793	462 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	HSPA4	P34932	840 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	GRM4	Q14833	912 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	CDC37	Q16543	378 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	TKFC	Q3LXA3	575 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	MUM1L1	Q5H9M0	696 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	ZNF654	Q8IZM8	581 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	CTCFL	Q8NI51	663 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	DEFB118	Q96PH6	123 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	RANBP17	Q9H2T7	1088 aa	Known RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	HMX1	Q9NP08	348 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	SNX14	Q9Y5W7	946 aa		11.2	□□□□□ -0.62
PSMD4-208	ENST00000462970	POTEB2	H3BUK9	544 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	CACNB2	Q08289	660 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	BLOC1S2	Q6QNY1	142 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	SYNE3	Q6ZMZ3	975 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	DHX32	Q7L7V1	743 aa	Known RBP	11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	HOMER1	Q86YM7	354 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	TMTC2	Q8N394	836 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	MAML3	Q96JK9	1138 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	RNF39	Q9H2S5	420 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	MAD2L2	Q9UI95	211 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	SLC12A7	Q9Y666	1083 aa		11.19	□□□□□ -0.62
PSMD4-208	ENST00000462970	RPTOR	Q8N122	1335 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	PTPDC1	A2A3K4	754 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	DDAH1	O94760	285 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	GJB1	P08034	283 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	HMGB1	P09429	215 aa	Known RBP	11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	HOXC6	P09630	235 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	CAST	P20810	708 aa	Known RBP	11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	CCND3	P30281	292 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	KIF5B	P33176	963 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	CNTN2	Q02246	1040 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	QRICH1	Q2TAL8	776 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	ZNF792	Q3KQV3	632 aa		11.18	□□□□□ -0.62
PSMD4-208	ENST00000462970	PRAMEF19	Q5SWL8	479 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms