RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 ZNF543Q08ER8 600 aa23.99■■□□□ 1.43
SCAF8-204ENST00000461219 OLFML2BQ68BL8 750 aa23.99■■□□□ 1.43
SCAF8-204ENST00000461219 AGBL1Q96MI9 1066 aa23.99■■□□□ 1.43
SCAF8-204ENST00000461219 LSG1Q9H089 658 aaKnown RBP23.99■■□□□ 1.43
SCAF8-204ENST00000461219 ACAD9Q9H845 621 aa23.99■■□□□ 1.43
SCAF8-204ENST00000461219 RNF146Q9NTX7 359 aa23.99■■□□□ 1.43
SCAF8-204ENST00000461219 PDE4DIPQ5VU43 2346 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 FARP2O94887 1054 aaPredicted RBP23.98■■□□□ 1.43
SCAF8-204ENST00000461219 PARP1P09874 1014 aaKnown RBP23.98■■□□□ 1.43
SCAF8-204ENST00000461219 TKFCQ3LXA3 575 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 MAP3K21Q5TCX8 1036 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 CYB5R4Q7L1T6 521 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 MAML3Q96JK9 1138 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 SMCHD1A6NHR9 2005 aa23.98■■□□□ 1.43
SCAF8-204ENST00000461219 MCM3APO60318 1980 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 GOLGA8HP0CJ92 632 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 CCND3P30281 292 aaPredicted RBP23.97■■□□□ 1.43
SCAF8-204ENST00000461219 WTAPQ15007 396 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 ASPRV1Q53RT3 343 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 BTNL9Q6UXG8 535 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 ANKS1AQ92625 1134 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 SHISA4Q96DD7 197 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 TRERF1Q96PN7 1200 aa23.97■■□□□ 1.43
SCAF8-204ENST00000461219 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
SCAF8-204ENST00000461219 DIS3Q9Y2L1 958 aaKnown RBP23.96■■□□□ 1.43
SCAF8-204ENST00000461219 BRCA2P51587 3418 aa23.96■■□□□ 1.43
SCAF8-204ENST00000461219 SLC27A2O14975 620 aa23.95■■□□□ 1.42
SCAF8-204ENST00000461219 ICAM1P05362 532 aa23.95■■□□□ 1.42
SCAF8-204ENST00000461219 TMEM67Q5HYA8 995 aa23.95■■□□□ 1.42
SCAF8-204ENST00000461219 CREB3L3Q68CJ9 461 aa23.95■■□□□ 1.42
SCAF8-204ENST00000461219 CHST3Q7LGC8 479 aa23.95■■□□□ 1.42
SCAF8-204ENST00000461219 RANBP17Q9H2T7 1088 aaKnown RBP23.95■■□□□ 1.42
SCAF8-204ENST00000461219 PFASO15067 1338 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 MSCO60682 206 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 SNHG28P0DPA3 235 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 ZNF792Q3KQV3 632 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 STOX1Q6ZVD7 989 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 UBA5Q9GZZ9 404 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 CNPY2Q9Y2B0 182 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 TAF6LQ9Y6J9 622 aa23.94■■□□□ 1.42
SCAF8-204ENST00000461219 ZNF536O15090 1300 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 TNRC18O15417 2968 aaPredicted RBP23.93■■□□□ 1.42
SCAF8-204ENST00000461219 MCM5P33992 734 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 SEC23AQ15436 765 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 NSMFQ6X4W1 530 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 TINF2Q9BSI4 451 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 HTATIP2Q9BUP3 242 aa23.93■■□□□ 1.42
SCAF8-204ENST00000461219 POTEB2H3BUK9 544 aa23.92■■□□□ 1.42
SCAF8-204ENST00000461219 NFXL1Q6ZNB6 911 aa23.92■■□□□ 1.42
SCAF8-204ENST00000461219 CATIPQ7Z7H3 387 aa23.92■■□□□ 1.42
SCAF8-204ENST00000461219 ANKLE1Q8NAG6 615 aa23.92■■□□□ 1.42
SCAF8-204ENST00000461219 CRISPLD2Q9H0B8 497 aa23.92■■□□□ 1.42
SCAF8-204ENST00000461219 DDX20Q9UHI6 824 aaKnown RBP23.92■■□□□ 1.42
SCAF8-204ENST00000461219 PRC1O43663 620 aa23.91■■□□□ 1.42
SCAF8-204ENST00000461219 CYBAP13498 195 aa23.91■■□□□ 1.42
SCAF8-204ENST00000461219 NECTIN1Q15223 517 aa23.91■■□□□ 1.42
SCAF8-204ENST00000461219 DPF3Q92784 378 aa23.91■■□□□ 1.42
SCAF8-204ENST00000461219 VAT1LQ9HCJ6 419 aa23.91■■□□□ 1.42
SCAF8-204ENST00000461219 MYCNP04198 464 aaPredicted RBP23.9■■□□□ 1.42
SCAF8-204ENST00000461219 USH1GQ495M9 461 aa23.9■■□□□ 1.42
SCAF8-204ENST00000461219 PRAMEF19Q5SWL8 479 aa23.9■■□□□ 1.42
SCAF8-204ENST00000461219 NECAB2Q7Z6G3 386 aa23.9■■□□□ 1.42
SCAF8-204ENST00000461219 MB21D2Q8IYB1 491 aaPredicted RBP23.9■■□□□ 1.42
SCAF8-204ENST00000461219 MSL3Q8N5Y2 521 aaKnown RBP23.9■■□□□ 1.42
SCAF8-204ENST00000461219 CPVLQ9H3G5 476 aa23.9■■□□□ 1.42
SCAF8-204ENST00000461219 A1CFQ9NQ94 594 aaKnown RBP23.9■■□□□ 1.42
SCAF8-204ENST00000461219 PTPDC1A2A3K4 754 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 CCDC69A6NI79 296 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 REC8O95072 547 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 CDC37Q16543 378 aaPredicted RBP23.89■■□□□ 1.41
SCAF8-204ENST00000461219 MUM1L1Q5H9M0 696 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.89■■□□□ 1.41
SCAF8-204ENST00000461219 ADGRF4Q8IZF3 695 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 NUP133Q8WUM0 1156 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 PAWRQ96IZ0 340 aaKnown RBP23.89■■□□□ 1.41
SCAF8-204ENST00000461219 NRBP1Q9UHY1 535 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 OGDHLQ9ULD0 1010 aa23.89■■□□□ 1.41
SCAF8-204ENST00000461219 BAZ2BQ9UIF8 2168 aaKnown RBP23.88■■□□□ 1.41
SCAF8-204ENST00000461219 DNAJC25-GNG10A0A024R161 153 aa23.88■■□□□ 1.41
SCAF8-204ENST00000461219 KLRF2D3W0D1 207 aa23.88■■□□□ 1.41
SCAF8-204ENST00000461219 SEPT4O43236 478 aa23.88■■□□□ 1.41
SCAF8-204ENST00000461219 TAL1P17542 331 aaPredicted RBP23.88■■□□□ 1.41
SCAF8-204ENST00000461219 ZNF467Q7Z7K2 595 aaPredicted RBP23.88■■□□□ 1.41
SCAF8-204ENST00000461219 TRPV1Q8NER1 839 aa23.88■■□□□ 1.41
SCAF8-204ENST00000461219 TMEM87BQ96K49 555 aa23.88■■□□□ 1.41
SCAF8-204ENST00000461219 ZHX1Q9UKY1 873 aaPredicted RBP23.88■■□□□ 1.41
SCAF8-204ENST00000461219 WDR19Q8NEZ3 1342 aa23.87■■□□□ 1.41
SCAF8-204ENST00000461219 SYNGAP1Q96PV0 1343 aa23.87■■□□□ 1.41
SCAF8-204ENST00000461219 KRT32Q14532 448 aa23.87■■□□□ 1.41
SCAF8-204ENST00000461219 ANO1Q5XXA6 986 aa23.87■■□□□ 1.41
SCAF8-204ENST00000461219 TMTC2Q8N394 836 aa23.87■■□□□ 1.41
SCAF8-204ENST00000461219 ANTXR2P58335 489 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 CNTN2Q02246 1040 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 LHX8Q68G74 356 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 CTCFLQ8NI51 663 aaPredicted RBP23.86■■□□□ 1.41
SCAF8-204ENST00000461219 DIS3LQ8TF46 1054 aaKnown RBP23.86■■□□□ 1.41
SCAF8-204ENST00000461219 NEK1Q96PY6 1258 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 MTA3Q9BTC8 594 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 C11orf49Q9H6J7 331 aa23.86■■□□□ 1.41
SCAF8-204ENST00000461219 CYP39A1Q9NYL5 469 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms