RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 SCRN1Q12765 414 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 KIF22Q14807 665 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 GPAT2Q6NUI2 795 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 CATSPERGQ6ZRH7 1159 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 GTF3C2Q8WUA4 911 aaPredicted RBP16.72■□□□□ 0.27
COL5A3-202ENST00000461214 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
COL5A3-202ENST00000461214 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
COL5A3-202ENST00000461214 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 BTBD19C9JJ37 291 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 CPLX1O14810 134 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 FLOT1O75955 427 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 CDC27P30260 824 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.27
COL5A3-202ENST00000461214 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
COL5A3-202ENST00000461214 IKQ13123 557 aaPredicted RBP16.71■□□□□ 0.27
COL5A3-202ENST00000461214 STK3Q13188 491 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 LBX2Q6XYB7 198 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 STAG2Q8N3U4 1231 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
COL5A3-202ENST00000461214 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
COL5A3-202ENST00000461214 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
COL5A3-202ENST00000461214 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 IFNAR1P17181 557 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 OSBPP22059 807 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 BECN1Q14457 450 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 COG2Q14746 738 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 PARK7Q99497 189 aaKnown RBP16.7■□□□□ 0.26
COL5A3-202ENST00000461214 LLPHQ9BRT6 129 aaKnown RBP16.7■□□□□ 0.26
COL5A3-202ENST00000461214 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
COL5A3-202ENST00000461214 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
COL5A3-202ENST00000461214 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
COL5A3-202ENST00000461214 PDHXO00330 501 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 PLEKHA8P1O95397 391 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 ST3GAL1Q11201 340 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 CUL4AQ13619 759 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 NTRK3Q16288 839 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 TRIM22Q8IYM9 498 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 ASCC2Q9H1I8 757 aaPredicted RBP16.69■□□□□ 0.26
COL5A3-202ENST00000461214 HOXC10Q9NYD6 342 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 LRRC37A2A6NM11 1700 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 COL6A3P12111 3177 aa16.69■□□□□ 0.26
COL5A3-202ENST00000461214 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
COL5A3-202ENST00000461214 DSG3P32926 999 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
COL5A3-202ENST00000461214 FUT2Q10981 343 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
COL5A3-202ENST00000461214 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 MTMR8Q96EF0 704 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
COL5A3-202ENST00000461214 FBXO28Q9NVF7 368 aa16.68■□□□□ 0.26
COL5A3-202ENST00000461214 BIN2Q9UBW5 565 aaPredicted RBP16.68■□□□□ 0.26
COL5A3-202ENST00000461214 MYH7BA7E2Y1 1941 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 CYTH3O43739 400 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 SLC16A2P36021 539 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 OAZ1P54368 228 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 HERVK_113P62684 666 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 LACTBP83111 547 aaPredicted RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 Q7L0L9 218 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 KIFC2Q96AC6 838 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 RRP36Q96EU6 259 aaKnown RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 INTS4Q96HW7 963 aaKnown RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 COL25A1Q9BXS0 654 aaPredicted RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 SEC63Q9UGP8 760 aaKnown RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
COL5A3-202ENST00000461214 ADGRA2Q96PE1 1338 aa16.67■□□□□ 0.26
COL5A3-202ENST00000461214 A0A1W2PPC1 479 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 VWA5AO00534 786 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 EVI5O60447 810 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
COL5A3-202ENST00000461214 CCL5P13501 91 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 TRAF1Q13077 416 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
COL5A3-202ENST00000461214 DOCK3Q8IZD9 2030 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 RAET1EQ8TD07 263 aa16.66■□□□□ 0.26
COL5A3-202ENST00000461214 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms