RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 USP17L18D6R9N7 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L22D6RA61 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L17D6RBQ6 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L19D6RCP7 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L20D6RJB6 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 SMIM22K7EJ46 135 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 RAD21O60216 631 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 USP17L24Q0WX57 530 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 ZYXQ15942 572 aaKnown RBP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 LSG1Q9H089 658 aaKnown RBP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 KIAA1683Q9H0B3 1180 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 GOPCQ9HD26 462 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 CXXC1Q9P0U4 656 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 PHF24Q9UPV7 400 aa14.73□□□□□ -0.05
HDAC4-207ENST00000461113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDAC4-207ENST00000461113 TTLL1O95922 423 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 FGRP09769 529 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 EEF2P13639 858 aaKnown RBP14.72□□□□□ -0.05
HDAC4-207ENST00000461113 OLFML2BQ68BL8 750 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-207ENST00000461113 NYAP2Q9P242 653 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 CLIP2Q9UDT6 1046 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 RLFQ13129 1914 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
HDAC4-207ENST00000461113 EPB41L2O43491 1005 aaKnown RBP14.71□□□□□ -0.05
HDAC4-207ENST00000461113 ADORA2AP29274 412 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 GUCY1A2P33402 732 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 TFF2Q03403 129 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 SART3Q15020 963 aaKnown RBP14.71□□□□□ -0.05
HDAC4-207ENST00000461113 TMEM31Q5JXX7 168 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 CATSPERGQ6ZRH7 1159 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 TBC1D10CQ8IV04 446 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 NCOA7Q8NI08 942 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 UBAC1Q9BSL1 405 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 INCENPQ9NQS7 918 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 MTMR4Q9NYA4 1195 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 SYNPO2Q9UMS6 1093 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 STX8Q9UNK0 236 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 TMX2Q9Y320 296 aa14.71□□□□□ -0.05
HDAC4-207ENST00000461113 NCOR1O75376 2440 aa14.71□□□□□ -0.06
HDAC4-207ENST00000461113 BAZ2AQ9UIF9 1905 aaKnown RBP14.7□□□□□ -0.06
HDAC4-207ENST00000461113 ERICH2A1L162 156 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 CYP21A2P08686 494 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 KCNQ1P51787 676 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 KRT32Q14532 448 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 CREB3L3Q68CJ9 461 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 MICALL1Q8N3F8 863 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 CEP95Q96GE4 821 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
HDAC4-207ENST00000461113 B4E1Z4 1266 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 SLC27A2O14975 620 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 KDM4AO75164 1064 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 TMEM240Q5SV17 173 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 LBX2Q6XYB7 198 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 TTC14Q96N46 770 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 XPNPEP3Q9NQH7 507 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 MSRAQ9UJ68 235 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
HDAC4-207ENST00000461113 PLIN4Q96Q06 1357 aa14.69□□□□□ -0.06
HDAC4-207ENST00000461113 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-207ENST00000461113 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 DCDC2CA8MYV0 355 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 E7EWF7 191 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 COBLO75128 1261 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 PGK1P00558 417 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 TIMP1P01033 207 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 NECTIN1Q15223 517 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 AAK1Q2M2I8 961 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 RNF180Q86T96 592 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC4-207ENST00000461113 NKX2-4Q9H2Z4 354 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 PIEZO1Q92508 2521 aa14.68□□□□□ -0.06
HDAC4-207ENST00000461113 NEDD4P46934 1319 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 ATAD5Q96QE3 1844 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 CHD9Q3L8U1 2897 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 FAM86C2PA6NEL3 165 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 SPDYE16A6NNV3 312 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 WDR46O15213 610 aaKnown RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 STRNO43815 780 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 HMGB1P09429 215 aaKnown RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 RARBP10826 455 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 TOP1P11387 765 aaKnown RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 VCAM1P19320 739 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 PPIGQ13427 754 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 RAB30Q15771 203 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 MFSD5Q6N075 450 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 ANKRD33Q7Z3H0 272 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 CLEC10AQ8IUN9 316 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms